Protein–RNA interactions for Protein: O70174

Chrna4, Neuronal acetylcholine receptor subunit alpha-4, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna4O70174 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chrna4O70174 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Chrna4O70174 Gm13875-201ENSMUST00000120162 282 ntBASIC12.62□□□□□ -0.39
Chrna4O70174 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.62□□□□□ -0.39
Chrna4O70174 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Chrna4O70174 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.62□□□□□ -0.39
Chrna4O70174 Gm27572-201ENSMUST00000183702 255 ntBASIC12.62□□□□□ -0.39
Chrna4O70174 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.62□□□□□ -0.39
Chrna4O70174 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Chrna4O70174 Gm18054-201ENSMUST00000207539 555 ntBASIC12.62□□□□□ -0.39
Chrna4O70174 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Chrna4O70174 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.62□□□□□ -0.39
Chrna4O70174 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chrna4O70174 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.62□□□□□ -0.39
Chrna4O70174 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chrna4O70174 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Chrna4O70174 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chrna4O70174 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.62□□□□□ -0.39
Chrna4O70174 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chrna4O70174 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Chrna4O70174 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chrna4O70174 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chrna4O70174 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chrna4O70174 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Chrna4O70174 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chrna4O70174 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chrna4O70174 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Chrna4O70174 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chrna4O70174 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Chrna4O70174 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chrna4O70174 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Chrna4O70174 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Chrna4O70174 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.62□□□□□ -0.39
Chrna4O70174 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Chrna4O70174 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.62□□□□□ -0.39
Chrna4O70174 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.62□□□□□ -0.39
Chrna4O70174 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chrna4O70174 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.61□□□□□ -0.39
Chrna4O70174 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chrna4O70174 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chrna4O70174 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chrna4O70174 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Chrna4O70174 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chrna4O70174 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chrna4O70174 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chrna4O70174 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Chrna4O70174 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chrna4O70174 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chrna4O70174 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chrna4O70174 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chrna4O70174 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chrna4O70174 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.61□□□□□ -0.39
Chrna4O70174 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chrna4O70174 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.61□□□□□ -0.39
Chrna4O70174 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Chrna4O70174 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chrna4O70174 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chrna4O70174 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Chrna4O70174 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.61□□□□□ -0.39
Chrna4O70174 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Chrna4O70174 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Chrna4O70174 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.61□□□□□ -0.39
Chrna4O70174 Gm39404-201ENSMUST00000216350 313 ntBASIC12.61□□□□□ -0.39
Chrna4O70174 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.61□□□□□ -0.39
Chrna4O70174 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.61□□□□□ -0.39
Chrna4O70174 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chrna4O70174 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chrna4O70174 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chrna4O70174 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chrna4O70174 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chrna4O70174 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chrna4O70174 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chrna4O70174 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
Chrna4O70174 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chrna4O70174 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chrna4O70174 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chrna4O70174 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chrna4O70174 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chrna4O70174 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chrna4O70174 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chrna4O70174 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.6□□□□□ -0.39
Chrna4O70174 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Chrna4O70174 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Chrna4O70174 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chrna4O70174 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.6□□□□□ -0.39
Chrna4O70174 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chrna4O70174 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Chrna4O70174 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.6□□□□□ -0.39
Chrna4O70174 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chrna4O70174 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chrna4O70174 Gm12742-201ENSMUST00000117326 410 ntBASIC12.6□□□□□ -0.39
Chrna4O70174 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chrna4O70174 Gm13392-201ENSMUST00000117708 150 ntBASIC12.6□□□□□ -0.39
Chrna4O70174 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.6□□□□□ -0.39
Chrna4O70174 Gm13342-201ENSMUST00000121055 207 ntBASIC12.6□□□□□ -0.39
Chrna4O70174 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.6□□□□□ -0.39
Chrna4O70174 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Chrna4O70174 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chrna4O70174 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.6□□□□□ -0.39
Chrna4O70174 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms