Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ldb2O55203 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.44□□□□□ -0.42
Ldb2O55203 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Ldb2O55203 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.44□□□□□ -0.42
Ldb2O55203 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ldb2O55203 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ldb2O55203 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ldb2O55203 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.44□□□□□ -0.42
Ldb2O55203 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ldb2O55203 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ldb2O55203 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ldb2O55203 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ldb2O55203 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ldb2O55203 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ldb2O55203 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ldb2O55203 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ldb2O55203 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ldb2O55203 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ldb2O55203 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ldb2O55203 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Ldb2O55203 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ldb2O55203 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.43□□□□□ -0.42
Ldb2O55203 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ldb2O55203 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ldb2O55203 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ldb2O55203 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Ldb2O55203 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ldb2O55203 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Ldb2O55203 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ldb2O55203 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.43□□□□□ -0.42
Ldb2O55203 Gm12058-201ENSMUST00000118614 437 ntBASIC12.43□□□□□ -0.42
Ldb2O55203 Gm11793-201ENSMUST00000120433 981 ntBASIC12.43□□□□□ -0.42
Ldb2O55203 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ldb2O55203 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ldb2O55203 Gm23119-201ENSMUST00000158610 140 ntBASIC12.43□□□□□ -0.42
Ldb2O55203 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Ldb2O55203 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Ldb2O55203 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ldb2O55203 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ldb2O55203 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.43□□□□□ -0.42
Ldb2O55203 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.43□□□□□ -0.42
Ldb2O55203 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Ldb2O55203 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ldb2O55203 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ldb2O55203 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ldb2O55203 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Ldb2O55203 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ldb2O55203 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.43□□□□□ -0.42
Ldb2O55203 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.43□□□□□ -0.42
Ldb2O55203 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ldb2O55203 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Ldb2O55203 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ldb2O55203 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ldb2O55203 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ldb2O55203 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ldb2O55203 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.42□□□□□ -0.42
Ldb2O55203 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ldb2O55203 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ldb2O55203 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Ldb2O55203 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Ldb2O55203 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.42□□□□□ -0.42
Ldb2O55203 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ldb2O55203 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ldb2O55203 Gm45331-201ENSMUST00000209868 554 ntBASIC12.42□□□□□ -0.42
Ldb2O55203 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ldb2O55203 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Ldb2O55203 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Ldb2O55203 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ldb2O55203 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ldb2O55203 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ldb2O55203 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ldb2O55203 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ldb2O55203 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Ldb2O55203 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ldb2O55203 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ldb2O55203 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ldb2O55203 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ldb2O55203 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ldb2O55203 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ldb2O55203 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Ldb2O55203 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ldb2O55203 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ldb2O55203 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ldb2O55203 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ldb2O55203 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ldb2O55203 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ldb2O55203 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ldb2O55203 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Ldb2O55203 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ldb2O55203 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ldb2O55203 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.41□□□□□ -0.42
Ldb2O55203 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ldb2O55203 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.41□□□□□ -0.42
Ldb2O55203 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ldb2O55203 Gm13786-201ENSMUST00000122371 333 ntBASIC12.41□□□□□ -0.42
Ldb2O55203 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.41□□□□□ -0.42
Ldb2O55203 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ldb2O55203 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Ldb2O55203 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Ldb2O55203 Mospd4-201ENSMUST00000180618 576 ntBASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms