Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Efnb3O35393 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Efnb3O35393 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Efnb3O35393 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.83
Efnb3O35393 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Efnb3O35393 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Efnb3O35393 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Efnb3O35393 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Efnb3O35393 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.83
Efnb3O35393 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.83
Efnb3O35393 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC9.9□□□□□ -0.83
Efnb3O35393 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.83
Efnb3O35393 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Efnb3O35393 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Efnb3O35393 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Efnb3O35393 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC9.89□□□□□ -0.83
Efnb3O35393 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Efnb3O35393 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC9.89□□□□□ -0.83
Efnb3O35393 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Efnb3O35393 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Efnb3O35393 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Efnb3O35393 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Efnb3O35393 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
Efnb3O35393 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Efnb3O35393 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Efnb3O35393 Gm18983-201ENSMUST00000222884 2729 ntBASIC9.89□□□□□ -0.83
Efnb3O35393 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Efnb3O35393 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Efnb3O35393 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Efnb3O35393 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Efnb3O35393 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Efnb3O35393 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Efnb3O35393 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Efnb3O35393 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC9.89□□□□□ -0.83
Efnb3O35393 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC9.89□□□□□ -0.83
Efnb3O35393 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC9.89□□□□□ -0.83
Efnb3O35393 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC9.89□□□□□ -0.83
Efnb3O35393 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Efnb3O35393 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Efnb3O35393 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Efnb3O35393 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC9.89□□□□□ -0.83
Efnb3O35393 Gm7558-201ENSMUST00000193221 1165 ntBASIC9.89□□□□□ -0.83
Efnb3O35393 Ighv5-13-201ENSMUST00000193550 290 ntBASIC9.89□□□□□ -0.83
Efnb3O35393 Gm45668-201ENSMUST00000211271 493 ntBASIC9.89□□□□□ -0.83
Efnb3O35393 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC9.89□□□□□ -0.83
Efnb3O35393 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Efnb3O35393 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Efnb3O35393 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Efnb3O35393 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Efnb3O35393 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Efnb3O35393 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Efnb3O35393 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Efnb3O35393 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Efnb3O35393 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Efnb3O35393 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Efnb3O35393 Gm18227-201ENSMUST00000211082 1468 ntBASIC9.89□□□□□ -0.83
Efnb3O35393 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Efnb3O35393 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Efnb3O35393 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Efnb3O35393 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Efnb3O35393 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Efnb3O35393 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Efnb3O35393 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Efnb3O35393 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Efnb3O35393 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC9.89□□□□□ -0.83
Efnb3O35393 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Efnb3O35393 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Efnb3O35393 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
Efnb3O35393 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Efnb3O35393 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Efnb3O35393 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Efnb3O35393 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC9.88□□□□□ -0.83
Efnb3O35393 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Efnb3O35393 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Efnb3O35393 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
Efnb3O35393 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Efnb3O35393 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Efnb3O35393 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Efnb3O35393 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Efnb3O35393 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Efnb3O35393 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC9.88□□□□□ -0.83
Efnb3O35393 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Efnb3O35393 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Efnb3O35393 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Efnb3O35393 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Efnb3O35393 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Efnb3O35393 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Efnb3O35393 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC9.88□□□□□ -0.83
Efnb3O35393 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Efnb3O35393 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC9.88□□□□□ -0.83
Efnb3O35393 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC9.88□□□□□ -0.83
Efnb3O35393 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Efnb3O35393 Gm42599-201ENSMUST00000201308 469 ntBASIC9.88□□□□□ -0.83
Efnb3O35393 Gm44064-201ENSMUST00000204964 1087 ntBASIC9.88□□□□□ -0.83
Efnb3O35393 AC155286.1-201ENSMUST00000218632 448 ntBASIC9.88□□□□□ -0.83
Efnb3O35393 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Efnb3O35393 Gm10371-202ENSMUST00000228010 1081 ntBASIC9.88□□□□□ -0.83
Efnb3O35393 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Efnb3O35393 Gm16372-201ENSMUST00000073088 450 ntBASIC9.88□□□□□ -0.83
Efnb3O35393 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms