Protein–RNA interactions for Protein: O08759

Ube3a, Ubiquitin-protein ligase E3A, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3aO08759 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Ube3aO08759 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ube3aO08759 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ube3aO08759 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC13.53□□□□□ -0.24
Ube3aO08759 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ube3aO08759 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ube3aO08759 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ube3aO08759 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Ube3aO08759 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ube3aO08759 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ube3aO08759 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Ube3aO08759 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Ube3aO08759 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Ube3aO08759 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ube3aO08759 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC13.52□□□□□ -0.24
Ube3aO08759 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Ube3aO08759 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ube3aO08759 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Ube3aO08759 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ube3aO08759 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC13.52□□□□□ -0.24
Ube3aO08759 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Ube3aO08759 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC13.52□□□□□ -0.24
Ube3aO08759 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ube3aO08759 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.52□□□□□ -0.25
Ube3aO08759 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ube3aO08759 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ube3aO08759 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Ube3aO08759 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ube3aO08759 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ube3aO08759 Mir7654-201ENSMUST00000185082 70 ntBASIC13.52□□□□□ -0.25
Ube3aO08759 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ube3aO08759 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ube3aO08759 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ube3aO08759 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ube3aO08759 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ube3aO08759 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ube3aO08759 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ube3aO08759 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ube3aO08759 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ube3aO08759 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ube3aO08759 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ube3aO08759 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ube3aO08759 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ube3aO08759 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ube3aO08759 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ube3aO08759 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ube3aO08759 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ube3aO08759 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ube3aO08759 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ube3aO08759 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ube3aO08759 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ube3aO08759 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Ube3aO08759 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC13.51□□□□□ -0.25
Ube3aO08759 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Ube3aO08759 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ube3aO08759 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ube3aO08759 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Ube3aO08759 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ube3aO08759 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Ube3aO08759 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ube3aO08759 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC13.51□□□□□ -0.25
Ube3aO08759 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ube3aO08759 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ube3aO08759 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ube3aO08759 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ube3aO08759 Cog3-203ENSMUST00000227473 4197 ntBASIC13.51□□□□□ -0.25
Ube3aO08759 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ube3aO08759 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ube3aO08759 Gm11478-201ENSMUST00000117851 599 ntBASIC13.51□□□□□ -0.25
Ube3aO08759 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.51□□□□□ -0.25
Ube3aO08759 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.51□□□□□ -0.25
Ube3aO08759 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Ube3aO08759 Gm23363-201ENSMUST00000175024 79 ntBASIC13.51□□□□□ -0.25
Ube3aO08759 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.51□□□□□ -0.25
Ube3aO08759 Gm8099-201ENSMUST00000200510 742 ntBASIC13.51□□□□□ -0.25
Ube3aO08759 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.51□□□□□ -0.25
Ube3aO08759 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC13.51□□□□□ -0.25
Ube3aO08759 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Ube3aO08759 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ube3aO08759 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ube3aO08759 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC13.51□□□□□ -0.25
Ube3aO08759 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Ube3aO08759 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ube3aO08759 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Ube3aO08759 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ube3aO08759 Gm43174-201ENSMUST00000195914 2445 ntBASIC13.51□□□□□ -0.25
Ube3aO08759 Gm2238-201ENSMUST00000192074 3669 ntBASIC13.51□□□□□ -0.25
Ube3aO08759 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ube3aO08759 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ube3aO08759 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ube3aO08759 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ube3aO08759 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ube3aO08759 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ube3aO08759 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ube3aO08759 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Ube3aO08759 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ube3aO08759 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Ube3aO08759 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ube3aO08759 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ube3aO08759 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms