Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav12d-1A0N8R0 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Trav12d-1A0N8R0 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC10.06□□□□□ -0.8
Trav12d-1A0N8R0 CT025678.1-201ENSMUST00000214795 2972 ntBASIC10.06□□□□□ -0.8
Trav12d-1A0N8R0 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav12d-1A0N8R0 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav12d-1A0N8R0 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav12d-1A0N8R0 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC10.06□□□□□ -0.8
Trav12d-1A0N8R0 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav12d-1A0N8R0 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC10.06□□□□□ -0.8
Trav12d-1A0N8R0 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Trav12d-1A0N8R0 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav12d-1A0N8R0 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav12d-1A0N8R0 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC10.06□□□□□ -0.8
Trav12d-1A0N8R0 AC154517.2-201ENSMUST00000220829 2458 ntBASIC10.06□□□□□ -0.8
Trav12d-1A0N8R0 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav12d-1A0N8R0 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav12d-1A0N8R0 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav12d-1A0N8R0 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Trav12d-1A0N8R0 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav12d-1A0N8R0 Gm14608-201ENSMUST00000120030 1553 ntBASIC10.05□□□□□ -0.8
Trav12d-1A0N8R0 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Trav12d-1A0N8R0 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav12d-1A0N8R0 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav12d-1A0N8R0 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Trav12d-1A0N8R0 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav12d-1A0N8R0 Gm44260-201ENSMUST00000204946 2094 ntBASIC10.05□□□□□ -0.8
Trav12d-1A0N8R0 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav12d-1A0N8R0 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC10.05□□□□□ -0.8
Trav12d-1A0N8R0 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav12d-1A0N8R0 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Trav12d-1A0N8R0 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav12d-1A0N8R0 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav12d-1A0N8R0 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav12d-1A0N8R0 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav12d-1A0N8R0 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC10.05□□□□□ -0.8
Trav12d-1A0N8R0 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav12d-1A0N8R0 Gm15920-201ENSMUST00000118998 402 ntBASIC10.05□□□□□ -0.8
Trav12d-1A0N8R0 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
Trav12d-1A0N8R0 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav12d-1A0N8R0 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav12d-1A0N8R0 Gm26185-201ENSMUST00000157692 266 ntBASIC10.05□□□□□ -0.8
Trav12d-1A0N8R0 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav12d-1A0N8R0 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav12d-1A0N8R0 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC10.05□□□□□ -0.8
Trav12d-1A0N8R0 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Trav12d-1A0N8R0 Gm8463-201ENSMUST00000208573 613 ntBASIC10.05□□□□□ -0.8
Trav12d-1A0N8R0 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC10.05□□□□□ -0.8
Trav12d-1A0N8R0 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC10.05□□□□□ -0.8
Trav12d-1A0N8R0 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC10.05□□□□□ -0.8
Trav12d-1A0N8R0 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC10.05□□□□□ -0.8
Trav12d-1A0N8R0 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav12d-1A0N8R0 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav12d-1A0N8R0 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav12d-1A0N8R0 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav12d-1A0N8R0 n-R5s77-201ENSMUST00000083757 119 ntBASIC10.05□□□□□ -0.8
Trav12d-1A0N8R0 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav12d-1A0N8R0 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav12d-1A0N8R0 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav12d-1A0N8R0 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav12d-1A0N8R0 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav12d-1A0N8R0 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC10.05□□□□□ -0.8
Trav12d-1A0N8R0 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav12d-1A0N8R0 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav12d-1A0N8R0 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC10.05□□□□□ -0.8
Trav12d-1A0N8R0 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC10.05□□□□□ -0.8
Trav12d-1A0N8R0 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav12d-1A0N8R0 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav12d-1A0N8R0 Gm43321-201ENSMUST00000198897 2409 ntBASIC10.05□□□□□ -0.8
Trav12d-1A0N8R0 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav12d-1A0N8R0 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav12d-1A0N8R0 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC10.05□□□□□ -0.8
Trav12d-1A0N8R0 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav12d-1A0N8R0 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav12d-1A0N8R0 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav12d-1A0N8R0 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav12d-1A0N8R0 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav12d-1A0N8R0 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav12d-1A0N8R0 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav12d-1A0N8R0 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav12d-1A0N8R0 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav12d-1A0N8R0 Gm2238-201ENSMUST00000192074 3669 ntBASIC10.04□□□□□ -0.8
Trav12d-1A0N8R0 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Trav12d-1A0N8R0 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav12d-1A0N8R0 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav12d-1A0N8R0 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav12d-1A0N8R0 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Trav12d-1A0N8R0 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Trav12d-1A0N8R0 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC10.04□□□□□ -0.8
Trav12d-1A0N8R0 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav12d-1A0N8R0 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav12d-1A0N8R0 Gm43075-201ENSMUST00000198613 3905 ntBASIC10.04□□□□□ -0.8
Trav12d-1A0N8R0 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav12d-1A0N8R0 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav12d-1A0N8R0 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Trav12d-1A0N8R0 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav12d-1A0N8R0 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC10.04□□□□□ -0.8
Trav12d-1A0N8R0 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav12d-1A0N8R0 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC10.04□□□□□ -0.8
Trav12d-1A0N8R0 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms