Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cfap99A0A140LIX9 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cfap99A0A140LIX9 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cfap99A0A140LIX9 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cfap99A0A140LIX9 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cfap99A0A140LIX9 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cfap99A0A140LIX9 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC14.99□□□□□ -0.01
Cfap99A0A140LIX9 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cfap99A0A140LIX9 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cfap99A0A140LIX9 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC14.99□□□□□ -0.01
Cfap99A0A140LIX9 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cfap99A0A140LIX9 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cfap99A0A140LIX9 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cfap99A0A140LIX9 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Cfap99A0A140LIX9 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cfap99A0A140LIX9 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cfap99A0A140LIX9 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cfap99A0A140LIX9 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Cfap99A0A140LIX9 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cfap99A0A140LIX9 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cfap99A0A140LIX9 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cfap99A0A140LIX9 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cfap99A0A140LIX9 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cfap99A0A140LIX9 Gm43045-201ENSMUST00000198725 2095 ntBASIC14.98□□□□□ -0.01
Cfap99A0A140LIX9 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
Cfap99A0A140LIX9 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cfap99A0A140LIX9 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cfap99A0A140LIX9 Gm14028-201ENSMUST00000117434 479 ntBASIC14.98□□□□□ -0.01
Cfap99A0A140LIX9 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC14.98□□□□□ -0.01
Cfap99A0A140LIX9 Mir5120-201ENSMUST00000175020 78 ntBASIC14.98□□□□□ -0.01
Cfap99A0A140LIX9 Mir6979-201ENSMUST00000183927 56 ntBASIC14.98□□□□□ -0.01
Cfap99A0A140LIX9 Gm37986-201ENSMUST00000193285 383 ntBASIC14.98□□□□□ -0.01
Cfap99A0A140LIX9 Gstp-ps-201ENSMUST00000195526 631 ntBASIC14.98□□□□□ -0.01
Cfap99A0A140LIX9 Gm8099-201ENSMUST00000200510 742 ntBASIC14.98□□□□□ -0.01
Cfap99A0A140LIX9 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC14.98□□□□□ -0.01
Cfap99A0A140LIX9 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cfap99A0A140LIX9 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cfap99A0A140LIX9 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
Cfap99A0A140LIX9 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cfap99A0A140LIX9 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cfap99A0A140LIX9 Gm44094-201ENSMUST00000204703 2030 ntBASIC14.98□□□□□ -0.01
Cfap99A0A140LIX9 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cfap99A0A140LIX9 Gm8228-201ENSMUST00000189949 2192 ntBASIC14.98□□□□□ -0.01
Cfap99A0A140LIX9 Gm27194-201ENSMUST00000175753 2936 ntBASIC14.98□□□□□ -0.01
Cfap99A0A140LIX9 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cfap99A0A140LIX9 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC14.98□□□□□ -0.01
Cfap99A0A140LIX9 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cfap99A0A140LIX9 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cfap99A0A140LIX9 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cfap99A0A140LIX9 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cfap99A0A140LIX9 Gm26616-202ENSMUST00000195676 3107 ntBASIC14.97□□□□□ -0.01
Cfap99A0A140LIX9 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cfap99A0A140LIX9 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cfap99A0A140LIX9 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cfap99A0A140LIX9 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC14.97□□□□□ -0.01
Cfap99A0A140LIX9 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cfap99A0A140LIX9 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC14.97□□□□□ -0.01
Cfap99A0A140LIX9 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.97□□□□□ -0.01
Cfap99A0A140LIX9 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC14.97□□□□□ -0.01
Cfap99A0A140LIX9 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cfap99A0A140LIX9 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cfap99A0A140LIX9 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC14.97□□□□□ -0.01
Cfap99A0A140LIX9 Gm13665-201ENSMUST00000120830 528 ntBASIC14.97□□□□□ -0.01
Cfap99A0A140LIX9 Gm15547-201ENSMUST00000122152 333 ntBASIC14.97□□□□□ -0.01
Cfap99A0A140LIX9 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
Cfap99A0A140LIX9 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cfap99A0A140LIX9 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cfap99A0A140LIX9 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cfap99A0A140LIX9 AA914427-201ENSMUST00000193194 1166 ntBASIC14.97□□□□□ -0.01
Cfap99A0A140LIX9 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cfap99A0A140LIX9 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC14.97□□□□□ -0.01
Cfap99A0A140LIX9 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC14.97□□□□□ -0.01
Cfap99A0A140LIX9 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cfap99A0A140LIX9 Gm5846-201ENSMUST00000193146 1414 ntBASIC14.97□□□□□ -0.01
Cfap99A0A140LIX9 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cfap99A0A140LIX9 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cfap99A0A140LIX9 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cfap99A0A140LIX9 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cfap99A0A140LIX9 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Cfap99A0A140LIX9 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cfap99A0A140LIX9 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cfap99A0A140LIX9 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC14.97□□□□□ -0.01
Cfap99A0A140LIX9 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cfap99A0A140LIX9 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC14.97□□□□□ -0.01
Cfap99A0A140LIX9 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cfap99A0A140LIX9 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC14.97□□□□□ -0.01
Cfap99A0A140LIX9 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cfap99A0A140LIX9 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cfap99A0A140LIX9 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC14.96□□□□□ -0.01
Cfap99A0A140LIX9 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Cfap99A0A140LIX9 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cfap99A0A140LIX9 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cfap99A0A140LIX9 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC14.96□□□□□ -0.01
Cfap99A0A140LIX9 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cfap99A0A140LIX9 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cfap99A0A140LIX9 Gm38385-201ENSMUST00000194454 2351 ntBASIC14.96□□□□□ -0.01
Cfap99A0A140LIX9 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cfap99A0A140LIX9 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cfap99A0A140LIX9 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Cfap99A0A140LIX9 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms