Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC9.51□□□□□ -0.89
Trav3n-3A0A0G2JEM0 AC154767.3-201ENSMUST00000225150 1342 ntBASIC9.51□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC9.51□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Gm10829-201ENSMUST00000202084 2988 ntBASIC9.51□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC9.5□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav3n-3A0A0G2JEM0 AC156031.2-201ENSMUST00000213107 3310 ntBASIC9.5□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Gm9466-201ENSMUST00000218144 2246 ntBASIC9.5□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC9.5□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC9.5□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC9.5□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC9.5□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Gm6888-201ENSMUST00000221983 706 ntBASIC9.5□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC9.5□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC9.5□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC9.5□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC9.5□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav3n-3A0A0G2JEM0 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Trav3n-3A0A0G2JEM0 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC9.5□□□□□ -0.89
Trav3n-3A0A0G2JEM0 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC9.5□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Trav3n-3A0A0G2JEM0 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC9.49□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Gm44826-201ENSMUST00000207648 2332 ntBASIC9.49□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav3n-3A0A0G2JEM0 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Trav3n-3A0A0G2JEM0 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Gm38292-201ENSMUST00000192646 3045 ntBASIC9.49□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC9.49□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC9.49□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Gm26308-201ENSMUST00000157768 69 ntBASIC9.49□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Gm22175-201ENSMUST00000175007 78 ntBASIC9.49□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Gm25948-201ENSMUST00000175334 112 ntBASIC9.49□□□□□ -0.89
Trav3n-3A0A0G2JEM0 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC9.49□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Gm7390-201ENSMUST00000212452 1216 ntBASIC9.49□□□□□ -0.89
Trav3n-3A0A0G2JEM0 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms