Protein–RNA interactions for Protein: Q9ESF1

Otof, Otoferlin, mousemouse

Predictions only

Length 1,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OtofQ9ESF1 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC12.36□□□□□ -0.43
OtofQ9ESF1 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
OtofQ9ESF1 Gm6781-201ENSMUST00000038304 1242 ntBASIC12.36□□□□□ -0.43
OtofQ9ESF1 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
OtofQ9ESF1 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
OtofQ9ESF1 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.36□□□□□ -0.43
OtofQ9ESF1 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
OtofQ9ESF1 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
OtofQ9ESF1 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
OtofQ9ESF1 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
OtofQ9ESF1 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.36□□□□□ -0.43
OtofQ9ESF1 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
OtofQ9ESF1 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
OtofQ9ESF1 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
OtofQ9ESF1 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
OtofQ9ESF1 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
OtofQ9ESF1 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
OtofQ9ESF1 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
OtofQ9ESF1 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
OtofQ9ESF1 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
OtofQ9ESF1 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
OtofQ9ESF1 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.36□□□□□ -0.43
OtofQ9ESF1 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
OtofQ9ESF1 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
OtofQ9ESF1 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.36□□□□□ -0.43
OtofQ9ESF1 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC12.36□□□□□ -0.43
OtofQ9ESF1 Gm43378-201ENSMUST00000199336 582 ntBASIC12.36□□□□□ -0.43
OtofQ9ESF1 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
OtofQ9ESF1 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.36□□□□□ -0.43
OtofQ9ESF1 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
OtofQ9ESF1 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
OtofQ9ESF1 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
OtofQ9ESF1 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
OtofQ9ESF1 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
OtofQ9ESF1 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
OtofQ9ESF1 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
OtofQ9ESF1 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
OtofQ9ESF1 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
OtofQ9ESF1 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
OtofQ9ESF1 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
OtofQ9ESF1 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
OtofQ9ESF1 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
OtofQ9ESF1 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.35□□□□□ -0.43
OtofQ9ESF1 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
OtofQ9ESF1 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
OtofQ9ESF1 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
OtofQ9ESF1 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
OtofQ9ESF1 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
OtofQ9ESF1 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
OtofQ9ESF1 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC12.35□□□□□ -0.43
OtofQ9ESF1 Gm6506-201ENSMUST00000119775 1136 ntBASIC12.35□□□□□ -0.43
OtofQ9ESF1 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
OtofQ9ESF1 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
OtofQ9ESF1 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
OtofQ9ESF1 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC12.35□□□□□ -0.43
OtofQ9ESF1 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC12.35□□□□□ -0.43
OtofQ9ESF1 Gm4607-201ENSMUST00000206649 577 ntBASIC12.35□□□□□ -0.43
OtofQ9ESF1 Gm45770-201ENSMUST00000212105 616 ntBASIC12.35□□□□□ -0.43
OtofQ9ESF1 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.35□□□□□ -0.43
OtofQ9ESF1 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
OtofQ9ESF1 Ntng1-201ENSMUST00000051253 327 ntBASIC12.35□□□□□ -0.43
OtofQ9ESF1 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
OtofQ9ESF1 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
OtofQ9ESF1 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
OtofQ9ESF1 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
OtofQ9ESF1 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
OtofQ9ESF1 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
OtofQ9ESF1 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
OtofQ9ESF1 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.35□□□□□ -0.43
OtofQ9ESF1 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.35□□□□□ -0.43
OtofQ9ESF1 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
OtofQ9ESF1 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
OtofQ9ESF1 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
OtofQ9ESF1 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
OtofQ9ESF1 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
OtofQ9ESF1 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
OtofQ9ESF1 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
OtofQ9ESF1 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.34□□□□□ -0.43
OtofQ9ESF1 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
OtofQ9ESF1 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
OtofQ9ESF1 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
OtofQ9ESF1 Gm15711-201ENSMUST00000118889 535 ntBASIC12.34□□□□□ -0.43
OtofQ9ESF1 Gm8199-201ENSMUST00000121323 823 ntBASIC12.34□□□□□ -0.43
OtofQ9ESF1 Gm20426-201ENSMUST00000173657 440 ntBASIC12.34□□□□□ -0.43
OtofQ9ESF1 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
OtofQ9ESF1 Gm44100-201ENSMUST00000204329 436 ntBASIC12.34□□□□□ -0.43
OtofQ9ESF1 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC12.34□□□□□ -0.43
OtofQ9ESF1 CT009713.8-201ENSMUST00000225448 560 ntBASIC12.34□□□□□ -0.43
OtofQ9ESF1 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
OtofQ9ESF1 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.34□□□□□ -0.43
OtofQ9ESF1 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
OtofQ9ESF1 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.34□□□□□ -0.43
OtofQ9ESF1 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
OtofQ9ESF1 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
OtofQ9ESF1 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
OtofQ9ESF1 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
OtofQ9ESF1 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
OtofQ9ESF1 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
OtofQ9ESF1 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
OtofQ9ESF1 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms