Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx2-4Q9EQM3 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx2-4Q9EQM3 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx2-4Q9EQM3 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.83□□□□□ -0.36
Nkx2-4Q9EQM3 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.83□□□□□ -0.36
Nkx2-4Q9EQM3 AC158355.1-201ENSMUST00000215895 1705 ntBASIC12.83□□□□□ -0.36
Nkx2-4Q9EQM3 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx2-4Q9EQM3 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Nkx2-4Q9EQM3 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx2-4Q9EQM3 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx2-4Q9EQM3 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx2-4Q9EQM3 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx2-4Q9EQM3 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx2-4Q9EQM3 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx2-4Q9EQM3 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx2-4Q9EQM3 Gm1848-201ENSMUST00000120711 789 ntBASIC12.83□□□□□ -0.36
Nkx2-4Q9EQM3 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC12.83□□□□□ -0.36
Nkx2-4Q9EQM3 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.83□□□□□ -0.36
Nkx2-4Q9EQM3 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx2-4Q9EQM3 Gm23218-201ENSMUST00000158124 276 ntBASIC12.83□□□□□ -0.36
Nkx2-4Q9EQM3 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.83□□□□□ -0.36
Nkx2-4Q9EQM3 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx2-4Q9EQM3 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12.83□□□□□ -0.36
Nkx2-4Q9EQM3 Gm2965-201ENSMUST00000198365 343 ntBASIC12.83□□□□□ -0.36
Nkx2-4Q9EQM3 Gm19091-201ENSMUST00000208120 978 ntBASIC12.83□□□□□ -0.36
Nkx2-4Q9EQM3 AC129219.2-201ENSMUST00000224324 701 ntBASIC12.83□□□□□ -0.36
Nkx2-4Q9EQM3 Gm9785-201ENSMUST00000062642 1006 ntBASIC12.83□□□□□ -0.36
Nkx2-4Q9EQM3 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
Nkx2-4Q9EQM3 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.83□□□□□ -0.36
Nkx2-4Q9EQM3 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx2-4Q9EQM3 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx2-4Q9EQM3 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx2-4Q9EQM3 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.83□□□□□ -0.36
Nkx2-4Q9EQM3 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx2-4Q9EQM3 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx2-4Q9EQM3 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Nkx2-4Q9EQM3 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Nkx2-4Q9EQM3 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx2-4Q9EQM3 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx2-4Q9EQM3 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Nkx2-4Q9EQM3 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx2-4Q9EQM3 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx2-4Q9EQM3 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx2-4Q9EQM3 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.82□□□□□ -0.36
Nkx2-4Q9EQM3 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx2-4Q9EQM3 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx2-4Q9EQM3 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx2-4Q9EQM3 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Nkx2-4Q9EQM3 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx2-4Q9EQM3 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.82□□□□□ -0.36
Nkx2-4Q9EQM3 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx2-4Q9EQM3 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Nkx2-4Q9EQM3 Gm24934-201ENSMUST00000103764 111 ntBASIC12.82□□□□□ -0.36
Nkx2-4Q9EQM3 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC12.82□□□□□ -0.36
Nkx2-4Q9EQM3 Gm12857-201ENSMUST00000117678 592 ntBASIC12.82□□□□□ -0.36
Nkx2-4Q9EQM3 Gm14724-201ENSMUST00000118400 537 ntBASIC12.82□□□□□ -0.36
Nkx2-4Q9EQM3 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC12.82□□□□□ -0.36
Nkx2-4Q9EQM3 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.82□□□□□ -0.36
Nkx2-4Q9EQM3 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx2-4Q9EQM3 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx2-4Q9EQM3 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx2-4Q9EQM3 Gm18304-201ENSMUST00000189162 546 ntBASIC12.82□□□□□ -0.36
Nkx2-4Q9EQM3 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx2-4Q9EQM3 Gm42518-201ENSMUST00000196277 938 ntBASIC12.82□□□□□ -0.36
Nkx2-4Q9EQM3 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC12.82□□□□□ -0.36
Nkx2-4Q9EQM3 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx2-4Q9EQM3 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Nkx2-4Q9EQM3 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.82□□□□□ -0.36
Nkx2-4Q9EQM3 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Nkx2-4Q9EQM3 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Nkx2-4Q9EQM3 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx2-4Q9EQM3 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx2-4Q9EQM3 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx2-4Q9EQM3 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx2-4Q9EQM3 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Nkx2-4Q9EQM3 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx2-4Q9EQM3 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx2-4Q9EQM3 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx2-4Q9EQM3 Gm13384-201ENSMUST00000117166 1344 ntBASIC12.82□□□□□ -0.36
Nkx2-4Q9EQM3 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.82□□□□□ -0.36
Nkx2-4Q9EQM3 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.82□□□□□ -0.36
Nkx2-4Q9EQM3 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx2-4Q9EQM3 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.82□□□□□ -0.36
Nkx2-4Q9EQM3 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx2-4Q9EQM3 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx2-4Q9EQM3 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx2-4Q9EQM3 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx2-4Q9EQM3 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx2-4Q9EQM3 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC12.81□□□□□ -0.36
Nkx2-4Q9EQM3 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.81□□□□□ -0.36
Nkx2-4Q9EQM3 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Nkx2-4Q9EQM3 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx2-4Q9EQM3 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx2-4Q9EQM3 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
Nkx2-4Q9EQM3 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx2-4Q9EQM3 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx2-4Q9EQM3 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Nkx2-4Q9EQM3 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx2-4Q9EQM3 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx2-4Q9EQM3 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms