Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cpne8Q9DC53 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Cpne8Q9DC53 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cpne8Q9DC53 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cpne8Q9DC53 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cpne8Q9DC53 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cpne8Q9DC53 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cpne8Q9DC53 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cpne8Q9DC53 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cpne8Q9DC53 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cpne8Q9DC53 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cpne8Q9DC53 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Cpne8Q9DC53 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Cpne8Q9DC53 Gm11658-201ENSMUST00000120913 1008 ntBASIC13.04□□□□□ -0.32
Cpne8Q9DC53 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.04□□□□□ -0.32
Cpne8Q9DC53 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC13.04□□□□□ -0.32
Cpne8Q9DC53 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cpne8Q9DC53 Rmrp-201ENSMUST00000157463 271 ntBASIC13.04□□□□□ -0.32
Cpne8Q9DC53 Gm25927-201ENSMUST00000175058 117 ntBASIC13.04□□□□□ -0.32
Cpne8Q9DC53 Gm2467-201ENSMUST00000182266 1010 ntBASIC13.04□□□□□ -0.32
Cpne8Q9DC53 Gm6981-201ENSMUST00000182467 1008 ntBASIC13.04□□□□□ -0.32
Cpne8Q9DC53 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC13.04□□□□□ -0.32
Cpne8Q9DC53 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13.04□□□□□ -0.32
Cpne8Q9DC53 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Cpne8Q9DC53 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC13.04□□□□□ -0.32
Cpne8Q9DC53 AL732506.1-201ENSMUST00000226420 281 ntBASIC13.04□□□□□ -0.32
Cpne8Q9DC53 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Cpne8Q9DC53 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cpne8Q9DC53 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cpne8Q9DC53 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cpne8Q9DC53 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cpne8Q9DC53 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cpne8Q9DC53 Gm43579-201ENSMUST00000202387 1307 ntBASIC13.04□□□□□ -0.32
Cpne8Q9DC53 AC114008.2-201ENSMUST00000227699 1347 ntBASIC13.04□□□□□ -0.32
Cpne8Q9DC53 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cpne8Q9DC53 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cpne8Q9DC53 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cpne8Q9DC53 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Cpne8Q9DC53 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.04□□□□□ -0.32
Cpne8Q9DC53 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cpne8Q9DC53 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cpne8Q9DC53 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cpne8Q9DC53 Gm5884-201ENSMUST00000036712 1479 ntBASIC13.04□□□□□ -0.32
Cpne8Q9DC53 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cpne8Q9DC53 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cpne8Q9DC53 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpne8Q9DC53 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpne8Q9DC53 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpne8Q9DC53 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC13.03□□□□□ -0.32
Cpne8Q9DC53 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpne8Q9DC53 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Cpne8Q9DC53 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpne8Q9DC53 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpne8Q9DC53 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Cpne8Q9DC53 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC13.03□□□□□ -0.32
Cpne8Q9DC53 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.03□□□□□ -0.32
Cpne8Q9DC53 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpne8Q9DC53 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpne8Q9DC53 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpne8Q9DC53 Gm23931-201ENSMUST00000103842 109 ntBASIC13.03□□□□□ -0.32
Cpne8Q9DC53 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpne8Q9DC53 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC13.03□□□□□ -0.32
Cpne8Q9DC53 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC13.03□□□□□ -0.32
Cpne8Q9DC53 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC13.03□□□□□ -0.32
Cpne8Q9DC53 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cpne8Q9DC53 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cpne8Q9DC53 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Cpne8Q9DC53 Gm19184-201ENSMUST00000196798 928 ntBASIC13.03□□□□□ -0.32
Cpne8Q9DC53 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpne8Q9DC53 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpne8Q9DC53 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Cpne8Q9DC53 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Cpne8Q9DC53 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpne8Q9DC53 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cpne8Q9DC53 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Cpne8Q9DC53 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpne8Q9DC53 Gm7553-201ENSMUST00000185805 1426 ntBASIC13.03□□□□□ -0.32
Cpne8Q9DC53 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Cpne8Q9DC53 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cpne8Q9DC53 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpne8Q9DC53 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpne8Q9DC53 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpne8Q9DC53 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cpne8Q9DC53 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cpne8Q9DC53 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Cpne8Q9DC53 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Cpne8Q9DC53 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cpne8Q9DC53 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cpne8Q9DC53 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cpne8Q9DC53 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cpne8Q9DC53 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Cpne8Q9DC53 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Cpne8Q9DC53 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.33
Cpne8Q9DC53 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Cpne8Q9DC53 Gm4984-201ENSMUST00000115987 360 ntBASIC13.02□□□□□ -0.33
Cpne8Q9DC53 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC13.02□□□□□ -0.33
Cpne8Q9DC53 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cpne8Q9DC53 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cpne8Q9DC53 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cpne8Q9DC53 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms