Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp2aQ9DB34 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC13.09□□□□□ -0.31
Chmp2aQ9DB34 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp2aQ9DB34 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp2aQ9DB34 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Chmp2aQ9DB34 Gm8399-201ENSMUST00000082300 1117 ntBASIC13.09□□□□□ -0.31
Chmp2aQ9DB34 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp2aQ9DB34 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp2aQ9DB34 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp2aQ9DB34 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp2aQ9DB34 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp2aQ9DB34 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Chmp2aQ9DB34 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp2aQ9DB34 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp2aQ9DB34 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp2aQ9DB34 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp2aQ9DB34 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp2aQ9DB34 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC13.09□□□□□ -0.31
Chmp2aQ9DB34 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Chmp2aQ9DB34 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Chmp2aQ9DB34 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Chmp2aQ9DB34 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Chmp2aQ9DB34 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Chmp2aQ9DB34 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp2aQ9DB34 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp2aQ9DB34 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Chmp2aQ9DB34 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Chmp2aQ9DB34 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp2aQ9DB34 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp2aQ9DB34 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp2aQ9DB34 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp2aQ9DB34 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp2aQ9DB34 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.08□□□□□ -0.32
Chmp2aQ9DB34 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp2aQ9DB34 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Chmp2aQ9DB34 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Chmp2aQ9DB34 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp2aQ9DB34 Gm4986-201ENSMUST00000119731 549 ntBASIC13.08□□□□□ -0.32
Chmp2aQ9DB34 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC13.08□□□□□ -0.32
Chmp2aQ9DB34 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp2aQ9DB34 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp2aQ9DB34 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp2aQ9DB34 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Chmp2aQ9DB34 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC13.08□□□□□ -0.32
Chmp2aQ9DB34 Gm16296-201ENSMUST00000159905 325 ntBASIC13.08□□□□□ -0.32
Chmp2aQ9DB34 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp2aQ9DB34 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp2aQ9DB34 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC13.08□□□□□ -0.32
Chmp2aQ9DB34 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp2aQ9DB34 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Chmp2aQ9DB34 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp2aQ9DB34 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp2aQ9DB34 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp2aQ9DB34 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp2aQ9DB34 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp2aQ9DB34 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp2aQ9DB34 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp2aQ9DB34 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp2aQ9DB34 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chmp2aQ9DB34 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chmp2aQ9DB34 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chmp2aQ9DB34 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chmp2aQ9DB34 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chmp2aQ9DB34 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.07□□□□□ -0.32
Chmp2aQ9DB34 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chmp2aQ9DB34 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13.07□□□□□ -0.32
Chmp2aQ9DB34 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Chmp2aQ9DB34 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Chmp2aQ9DB34 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Chmp2aQ9DB34 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC13.07□□□□□ -0.32
Chmp2aQ9DB34 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chmp2aQ9DB34 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chmp2aQ9DB34 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Chmp2aQ9DB34 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chmp2aQ9DB34 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
Chmp2aQ9DB34 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC13.07□□□□□ -0.32
Chmp2aQ9DB34 Gm15370-201ENSMUST00000117158 253 ntBASIC13.07□□□□□ -0.32
Chmp2aQ9DB34 Gm13316-201ENSMUST00000140537 691 ntBASIC13.07□□□□□ -0.32
Chmp2aQ9DB34 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC13.07□□□□□ -0.32
Chmp2aQ9DB34 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Chmp2aQ9DB34 Gm27501-201ENSMUST00000183599 107 ntBASIC13.07□□□□□ -0.32
Chmp2aQ9DB34 Gm29396-201ENSMUST00000185659 716 ntBASIC13.07□□□□□ -0.32
Chmp2aQ9DB34 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC13.07□□□□□ -0.32
Chmp2aQ9DB34 Gm37489-201ENSMUST00000191883 159 ntBASIC13.07□□□□□ -0.32
Chmp2aQ9DB34 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC13.07□□□□□ -0.32
Chmp2aQ9DB34 Gm18935-201ENSMUST00000212692 664 ntBASIC13.07□□□□□ -0.32
Chmp2aQ9DB34 AC108416.1-202ENSMUST00000228927 1201 ntBASIC13.07□□□□□ -0.32
Chmp2aQ9DB34 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Chmp2aQ9DB34 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chmp2aQ9DB34 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chmp2aQ9DB34 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chmp2aQ9DB34 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chmp2aQ9DB34 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Chmp2aQ9DB34 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Chmp2aQ9DB34 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chmp2aQ9DB34 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chmp2aQ9DB34 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Chmp2aQ9DB34 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Chmp2aQ9DB34 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chmp2aQ9DB34 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms