Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.43□□□□□ -0.42
Ssu72Q9CY97 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.43□□□□□ -0.42
Ssu72Q9CY97 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssu72Q9CY97 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssu72Q9CY97 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssu72Q9CY97 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssu72Q9CY97 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssu72Q9CY97 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssu72Q9CY97 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssu72Q9CY97 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.43□□□□□ -0.42
Ssu72Q9CY97 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssu72Q9CY97 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Ssu72Q9CY97 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssu72Q9CY97 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.43□□□□□ -0.42
Ssu72Q9CY97 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssu72Q9CY97 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssu72Q9CY97 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssu72Q9CY97 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssu72Q9CY97 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ssu72Q9CY97 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssu72Q9CY97 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.42□□□□□ -0.42
Ssu72Q9CY97 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssu72Q9CY97 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssu72Q9CY97 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC12.42□□□□□ -0.42
Ssu72Q9CY97 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Ssu72Q9CY97 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssu72Q9CY97 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.42□□□□□ -0.42
Ssu72Q9CY97 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.42□□□□□ -0.42
Ssu72Q9CY97 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssu72Q9CY97 Gm16479-201ENSMUST00000121706 932 ntBASIC12.42□□□□□ -0.42
Ssu72Q9CY97 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.42□□□□□ -0.42
Ssu72Q9CY97 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.42□□□□□ -0.42
Ssu72Q9CY97 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.42□□□□□ -0.42
Ssu72Q9CY97 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.42□□□□□ -0.42
Ssu72Q9CY97 Gm17208-201ENSMUST00000168388 535 ntBASIC12.42□□□□□ -0.42
Ssu72Q9CY97 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.42□□□□□ -0.42
Ssu72Q9CY97 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssu72Q9CY97 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.42□□□□□ -0.42
Ssu72Q9CY97 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Ssu72Q9CY97 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ssu72Q9CY97 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.42□□□□□ -0.42
Ssu72Q9CY97 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssu72Q9CY97 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssu72Q9CY97 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.42□□□□□ -0.42
Ssu72Q9CY97 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.42□□□□□ -0.42
Ssu72Q9CY97 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssu72Q9CY97 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Ssu72Q9CY97 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.42□□□□□ -0.42
Ssu72Q9CY97 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssu72Q9CY97 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ssu72Q9CY97 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssu72Q9CY97 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssu72Q9CY97 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
Ssu72Q9CY97 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ssu72Q9CY97 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Ssu72Q9CY97 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssu72Q9CY97 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ssu72Q9CY97 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Ssu72Q9CY97 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssu72Q9CY97 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.42□□□□□ -0.42
Ssu72Q9CY97 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssu72Q9CY97 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssu72Q9CY97 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssu72Q9CY97 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ssu72Q9CY97 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ssu72Q9CY97 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Ssu72Q9CY97 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ssu72Q9CY97 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ssu72Q9CY97 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ssu72Q9CY97 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ssu72Q9CY97 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ssu72Q9CY97 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ssu72Q9CY97 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ssu72Q9CY97 Gm12928-201ENSMUST00000117115 573 ntBASIC12.41□□□□□ -0.42
Ssu72Q9CY97 Gm8213-201ENSMUST00000118191 441 ntBASIC12.41□□□□□ -0.42
Ssu72Q9CY97 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.41□□□□□ -0.42
Ssu72Q9CY97 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ssu72Q9CY97 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.41□□□□□ -0.42
Ssu72Q9CY97 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Ssu72Q9CY97 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ssu72Q9CY97 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.41□□□□□ -0.42
Ssu72Q9CY97 Wdyhv1-203ENSMUST00000226889 394 ntBASIC12.41□□□□□ -0.42
Ssu72Q9CY97 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ssu72Q9CY97 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ssu72Q9CY97 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Ssu72Q9CY97 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ssu72Q9CY97 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ssu72Q9CY97 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ssu72Q9CY97 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ssu72Q9CY97 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ssu72Q9CY97 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ssu72Q9CY97 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ssu72Q9CY97 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ssu72Q9CY97 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ssu72Q9CY97 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Ssu72Q9CY97 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ssu72Q9CY97 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ssu72Q9CY97 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ssu72Q9CY97 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ssu72Q9CY97 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms