Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb22Q91XZ8 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.65□□□□□ -0.06
Pcdhb22Q91XZ8 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb22Q91XZ8 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb22Q91XZ8 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC14.65□□□□□ -0.06
Pcdhb22Q91XZ8 Gm11531-201ENSMUST00000117614 555 ntBASIC14.65□□□□□ -0.06
Pcdhb22Q91XZ8 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC14.65□□□□□ -0.06
Pcdhb22Q91XZ8 Gm8494-201ENSMUST00000178171 1233 ntBASIC14.65□□□□□ -0.06
Pcdhb22Q91XZ8 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Pcdhb22Q91XZ8 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC14.65□□□□□ -0.06
Pcdhb22Q91XZ8 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC14.65□□□□□ -0.06
Pcdhb22Q91XZ8 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC14.65□□□□□ -0.06
Pcdhb22Q91XZ8 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC14.65□□□□□ -0.06
Pcdhb22Q91XZ8 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC14.65□□□□□ -0.06
Pcdhb22Q91XZ8 Gm45878-201ENSMUST00000211839 241 ntBASIC14.65□□□□□ -0.06
Pcdhb22Q91XZ8 Gm9368-201ENSMUST00000219348 831 ntBASIC14.65□□□□□ -0.06
Pcdhb22Q91XZ8 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb22Q91XZ8 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb22Q91XZ8 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb22Q91XZ8 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC14.65□□□□□ -0.06
Pcdhb22Q91XZ8 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
Pcdhb22Q91XZ8 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb22Q91XZ8 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb22Q91XZ8 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb22Q91XZ8 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC14.65□□□□□ -0.06
Pcdhb22Q91XZ8 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb22Q91XZ8 Gm37437-201ENSMUST00000194451 1937 ntBASIC14.64□□□□□ -0.07
Pcdhb22Q91XZ8 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb22Q91XZ8 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC14.64□□□□□ -0.07
Pcdhb22Q91XZ8 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb22Q91XZ8 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb22Q91XZ8 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb22Q91XZ8 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb22Q91XZ8 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb22Q91XZ8 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb22Q91XZ8 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb22Q91XZ8 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
Pcdhb22Q91XZ8 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
Pcdhb22Q91XZ8 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb22Q91XZ8 Gm5637-201ENSMUST00000153890 1119 ntBASIC14.64□□□□□ -0.07
Pcdhb22Q91XZ8 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC14.64□□□□□ -0.07
Pcdhb22Q91XZ8 Gm27516-201ENSMUST00000184237 98 ntBASIC14.64□□□□□ -0.07
Pcdhb22Q91XZ8 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC14.64□□□□□ -0.07
Pcdhb22Q91XZ8 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC14.64□□□□□ -0.07
Pcdhb22Q91XZ8 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb22Q91XZ8 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb22Q91XZ8 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb22Q91XZ8 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb22Q91XZ8 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb22Q91XZ8 Gm44292-201ENSMUST00000205194 2364 ntBASIC14.64□□□□□ -0.07
Pcdhb22Q91XZ8 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb22Q91XZ8 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb22Q91XZ8 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb22Q91XZ8 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb22Q91XZ8 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb22Q91XZ8 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb22Q91XZ8 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb22Q91XZ8 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Pcdhb22Q91XZ8 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb22Q91XZ8 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb22Q91XZ8 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb22Q91XZ8 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb22Q91XZ8 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb22Q91XZ8 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb22Q91XZ8 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb22Q91XZ8 Gm18222-201ENSMUST00000202416 1387 ntBASIC14.63□□□□□ -0.07
Pcdhb22Q91XZ8 Gm45342-201ENSMUST00000210903 1363 ntBASIC14.63□□□□□ -0.07
Pcdhb22Q91XZ8 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb22Q91XZ8 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Pcdhb22Q91XZ8 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Pcdhb22Q91XZ8 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb22Q91XZ8 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.63□□□□□ -0.07
Pcdhb22Q91XZ8 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb22Q91XZ8 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Pcdhb22Q91XZ8 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC14.63□□□□□ -0.07
Pcdhb22Q91XZ8 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Pcdhb22Q91XZ8 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Pcdhb22Q91XZ8 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Pcdhb22Q91XZ8 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Pcdhb22Q91XZ8 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Pcdhb22Q91XZ8 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Pcdhb22Q91XZ8 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb22Q91XZ8 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Pcdhb22Q91XZ8 Gm11222-201ENSMUST00000119005 738 ntBASIC14.63□□□□□ -0.07
Pcdhb22Q91XZ8 Gm9083-201ENSMUST00000120423 819 ntBASIC14.63□□□□□ -0.07
Pcdhb22Q91XZ8 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb22Q91XZ8 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC14.63□□□□□ -0.07
Pcdhb22Q91XZ8 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb22Q91XZ8 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb22Q91XZ8 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC14.63□□□□□ -0.07
Pcdhb22Q91XZ8 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC14.63□□□□□ -0.07
Pcdhb22Q91XZ8 Mir8109-201ENSMUST00000184375 117 ntBASIC14.63□□□□□ -0.07
Pcdhb22Q91XZ8 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC14.63□□□□□ -0.07
Pcdhb22Q91XZ8 Gm44958-201ENSMUST00000203734 736 ntBASIC14.63□□□□□ -0.07
Pcdhb22Q91XZ8 Gm45484-201ENSMUST00000210310 1141 ntBASIC14.63□□□□□ -0.07
Pcdhb22Q91XZ8 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb22Q91XZ8 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Pcdhb22Q91XZ8 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Pcdhb22Q91XZ8 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb22Q91XZ8 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms