Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Nup35Q8R4R6 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Nup35Q8R4R6 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.78
Nup35Q8R4R6 AC154639.1-201ENSMUST00000224393 2849 ntBASIC10.21□□□□□ -0.78
Nup35Q8R4R6 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Nup35Q8R4R6 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Nup35Q8R4R6 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Nup35Q8R4R6 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Nup35Q8R4R6 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Nup35Q8R4R6 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Nup35Q8R4R6 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Nup35Q8R4R6 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Nup35Q8R4R6 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC10.21□□□□□ -0.78
Nup35Q8R4R6 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Nup35Q8R4R6 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Nup35Q8R4R6 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Nup35Q8R4R6 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nup35Q8R4R6 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nup35Q8R4R6 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Nup35Q8R4R6 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nup35Q8R4R6 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Nup35Q8R4R6 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nup35Q8R4R6 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nup35Q8R4R6 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nup35Q8R4R6 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nup35Q8R4R6 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Nup35Q8R4R6 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Nup35Q8R4R6 Gm15703-201ENSMUST00000120250 880 ntBASIC10.2□□□□□ -0.78
Nup35Q8R4R6 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Nup35Q8R4R6 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Nup35Q8R4R6 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC10.2□□□□□ -0.78
Nup35Q8R4R6 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Nup35Q8R4R6 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC10.2□□□□□ -0.78
Nup35Q8R4R6 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC10.2□□□□□ -0.78
Nup35Q8R4R6 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC10.2□□□□□ -0.78
Nup35Q8R4R6 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Nup35Q8R4R6 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Nup35Q8R4R6 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nup35Q8R4R6 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nup35Q8R4R6 Gm23363-201ENSMUST00000175024 79 ntBASIC10.2□□□□□ -0.78
Nup35Q8R4R6 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Nup35Q8R4R6 Gm42612-201ENSMUST00000197986 623 ntBASIC10.2□□□□□ -0.78
Nup35Q8R4R6 Gm43170-201ENSMUST00000199827 612 ntBASIC10.2□□□□□ -0.78
Nup35Q8R4R6 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Nup35Q8R4R6 Gm44260-201ENSMUST00000204946 2094 ntBASIC10.2□□□□□ -0.78
Nup35Q8R4R6 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Nup35Q8R4R6 AC139382.1-201ENSMUST00000221402 498 ntBASIC10.2□□□□□ -0.78
Nup35Q8R4R6 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nup35Q8R4R6 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nup35Q8R4R6 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nup35Q8R4R6 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC10.2□□□□□ -0.78
Nup35Q8R4R6 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Nup35Q8R4R6 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nup35Q8R4R6 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nup35Q8R4R6 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nup35Q8R4R6 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
Nup35Q8R4R6 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nup35Q8R4R6 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC10.2□□□□□ -0.78
Nup35Q8R4R6 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nup35Q8R4R6 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
Nup35Q8R4R6 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nup35Q8R4R6 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nup35Q8R4R6 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Nup35Q8R4R6 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Nup35Q8R4R6 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nup35Q8R4R6 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nup35Q8R4R6 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC10.19□□□□□ -0.78
Nup35Q8R4R6 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nup35Q8R4R6 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC10.19□□□□□ -0.78
Nup35Q8R4R6 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nup35Q8R4R6 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Nup35Q8R4R6 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nup35Q8R4R6 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Nup35Q8R4R6 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nup35Q8R4R6 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Nup35Q8R4R6 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nup35Q8R4R6 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Nup35Q8R4R6 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nup35Q8R4R6 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Nup35Q8R4R6 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Nup35Q8R4R6 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nup35Q8R4R6 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nup35Q8R4R6 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Nup35Q8R4R6 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nup35Q8R4R6 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nup35Q8R4R6 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Nup35Q8R4R6 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nup35Q8R4R6 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nup35Q8R4R6 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC10.19□□□□□ -0.78
Nup35Q8R4R6 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nup35Q8R4R6 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Nup35Q8R4R6 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nup35Q8R4R6 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nup35Q8R4R6 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Nup35Q8R4R6 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nup35Q8R4R6 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nup35Q8R4R6 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nup35Q8R4R6 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nup35Q8R4R6 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nup35Q8R4R6 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms