Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.41□□□□□ -0.58
Ebf4Q8K4J2 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ebf4Q8K4J2 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ebf4Q8K4J2 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ebf4Q8K4J2 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ebf4Q8K4J2 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
Ebf4Q8K4J2 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.41□□□□□ -0.58
Ebf4Q8K4J2 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Ebf4Q8K4J2 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Ebf4Q8K4J2 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ebf4Q8K4J2 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ebf4Q8K4J2 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ebf4Q8K4J2 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.41□□□□□ -0.58
Ebf4Q8K4J2 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.41□□□□□ -0.58
Ebf4Q8K4J2 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ebf4Q8K4J2 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ebf4Q8K4J2 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ebf4Q8K4J2 Gm9755-201ENSMUST00000032981 1356 ntBASIC11.41□□□□□ -0.58
Ebf4Q8K4J2 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ebf4Q8K4J2 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Ebf4Q8K4J2 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.58
Ebf4Q8K4J2 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.4□□□□□ -0.58
Ebf4Q8K4J2 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ebf4Q8K4J2 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC11.4□□□□□ -0.58
Ebf4Q8K4J2 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Ebf4Q8K4J2 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ebf4Q8K4J2 Gm10110-202ENSMUST00000228705 3220 ntBASIC11.4□□□□□ -0.58
Ebf4Q8K4J2 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ebf4Q8K4J2 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ebf4Q8K4J2 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ebf4Q8K4J2 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ebf4Q8K4J2 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ebf4Q8K4J2 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ebf4Q8K4J2 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.4□□□□□ -0.58
Ebf4Q8K4J2 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ebf4Q8K4J2 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ebf4Q8K4J2 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
Ebf4Q8K4J2 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.4□□□□□ -0.58
Ebf4Q8K4J2 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ebf4Q8K4J2 Gm25144-201ENSMUST00000179561 110 ntBASIC11.4□□□□□ -0.58
Ebf4Q8K4J2 Gm25352-201ENSMUST00000179815 110 ntBASIC11.4□□□□□ -0.58
Ebf4Q8K4J2 Gm38294-201ENSMUST00000192831 381 ntBASIC11.4□□□□□ -0.58
Ebf4Q8K4J2 Gm7774-201ENSMUST00000200064 533 ntBASIC11.4□□□□□ -0.58
Ebf4Q8K4J2 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC11.4□□□□□ -0.58
Ebf4Q8K4J2 Gm19078-201ENSMUST00000206311 727 ntBASIC11.4□□□□□ -0.58
Ebf4Q8K4J2 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC11.4□□□□□ -0.58
Ebf4Q8K4J2 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ebf4Q8K4J2 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ebf4Q8K4J2 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ebf4Q8K4J2 Mir339-201ENSMUST00000083659 96 ntBASIC11.4□□□□□ -0.58
Ebf4Q8K4J2 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ebf4Q8K4J2 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ebf4Q8K4J2 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ebf4Q8K4J2 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ebf4Q8K4J2 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ebf4Q8K4J2 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ebf4Q8K4J2 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ebf4Q8K4J2 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ebf4Q8K4J2 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ebf4Q8K4J2 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ebf4Q8K4J2 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.4□□□□□ -0.58
Ebf4Q8K4J2 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ebf4Q8K4J2 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ebf4Q8K4J2 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ebf4Q8K4J2 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Ebf4Q8K4J2 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC11.4□□□□□ -0.59
Ebf4Q8K4J2 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.4□□□□□ -0.59
Ebf4Q8K4J2 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Ebf4Q8K4J2 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
Ebf4Q8K4J2 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Ebf4Q8K4J2 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC11.39□□□□□ -0.59
Ebf4Q8K4J2 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ebf4Q8K4J2 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ebf4Q8K4J2 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ebf4Q8K4J2 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ebf4Q8K4J2 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ebf4Q8K4J2 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ebf4Q8K4J2 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Ebf4Q8K4J2 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ebf4Q8K4J2 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ebf4Q8K4J2 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ebf4Q8K4J2 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ebf4Q8K4J2 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Ebf4Q8K4J2 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC11.39□□□□□ -0.59
Ebf4Q8K4J2 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ebf4Q8K4J2 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.39□□□□□ -0.59
Ebf4Q8K4J2 Gm42550-201ENSMUST00000201553 960 ntBASIC11.39□□□□□ -0.59
Ebf4Q8K4J2 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
Ebf4Q8K4J2 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC11.39□□□□□ -0.59
Ebf4Q8K4J2 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ebf4Q8K4J2 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ebf4Q8K4J2 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC11.39□□□□□ -0.59
Ebf4Q8K4J2 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ebf4Q8K4J2 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
Ebf4Q8K4J2 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC11.39□□□□□ -0.59
Ebf4Q8K4J2 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC11.39□□□□□ -0.59
Ebf4Q8K4J2 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ebf4Q8K4J2 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ebf4Q8K4J2 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ebf4Q8K4J2 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms