Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Col23a1Q8K4G2 Gm18198-201ENSMUST00000204986 1551 ntBASIC15.05■□□□□ -0
Col23a1Q8K4G2 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col23a1Q8K4G2 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col23a1Q8K4G2 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col23a1Q8K4G2 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col23a1Q8K4G2 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Col23a1Q8K4G2 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Col23a1Q8K4G2 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Col23a1Q8K4G2 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col23a1Q8K4G2 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Col23a1Q8K4G2 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col23a1Q8K4G2 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC15.04■□□□□ -0
Col23a1Q8K4G2 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col23a1Q8K4G2 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col23a1Q8K4G2 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC15.04■□□□□ -0
Col23a1Q8K4G2 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC15.04■□□□□ -0
Col23a1Q8K4G2 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col23a1Q8K4G2 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col23a1Q8K4G2 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Col23a1Q8K4G2 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Col23a1Q8K4G2 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC15.04■□□□□ -0
Col23a1Q8K4G2 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC15.04■□□□□ -0
Col23a1Q8K4G2 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col23a1Q8K4G2 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
Col23a1Q8K4G2 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC15.04■□□□□ -0
Col23a1Q8K4G2 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC15.04■□□□□ -0
Col23a1Q8K4G2 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Col23a1Q8K4G2 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC15.04■□□□□ -0
Col23a1Q8K4G2 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col23a1Q8K4G2 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC15.04■□□□□ -0
Col23a1Q8K4G2 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC15.04■□□□□ -0
Col23a1Q8K4G2 AC124433.1-201ENSMUST00000224483 1063 ntBASIC15.04■□□□□ -0
Col23a1Q8K4G2 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC15.04■□□□□ -0
Col23a1Q8K4G2 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col23a1Q8K4G2 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC15.04■□□□□ -0
Col23a1Q8K4G2 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC15.04■□□□□ -0
Col23a1Q8K4G2 Gm5805-201ENSMUST00000072779 456 ntBASIC15.04■□□□□ -0
Col23a1Q8K4G2 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC15.04■□□□□ -0
Col23a1Q8K4G2 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col23a1Q8K4G2 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC15.04■□□□□ -0
Col23a1Q8K4G2 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Col23a1Q8K4G2 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC15.04■□□□□ -0
Col23a1Q8K4G2 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col23a1Q8K4G2 Gm5639-201ENSMUST00000122305 2403 ntBASIC15.04■□□□□ -0
Col23a1Q8K4G2 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC15.04■□□□□ -0
Col23a1Q8K4G2 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col23a1Q8K4G2 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Col23a1Q8K4G2 Gm28386-201ENSMUST00000189147 1849 ntBASIC15.03■□□□□ -0
Col23a1Q8K4G2 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col23a1Q8K4G2 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Col23a1Q8K4G2 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col23a1Q8K4G2 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Col23a1Q8K4G2 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col23a1Q8K4G2 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Col23a1Q8K4G2 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col23a1Q8K4G2 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Col23a1Q8K4G2 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col23a1Q8K4G2 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Col23a1Q8K4G2 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Col23a1Q8K4G2 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col23a1Q8K4G2 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Col23a1Q8K4G2 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col23a1Q8K4G2 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col23a1Q8K4G2 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC15.03■□□□□ -0
Col23a1Q8K4G2 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Col23a1Q8K4G2 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col23a1Q8K4G2 Gm12218-201ENSMUST00000117666 399 ntBASIC15.03■□□□□ -0
Col23a1Q8K4G2 Gm11979-201ENSMUST00000119629 743 ntBASIC15.03■□□□□ -0
Col23a1Q8K4G2 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col23a1Q8K4G2 Gm24844-201ENSMUST00000158679 127 ntBASIC15.03■□□□□ -0
Col23a1Q8K4G2 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col23a1Q8K4G2 Gm18201-201ENSMUST00000174735 875 ntBASIC15.03■□□□□ -0
Col23a1Q8K4G2 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC15.03■□□□□ -0
Col23a1Q8K4G2 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col23a1Q8K4G2 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC15.03■□□□□ -0
Col23a1Q8K4G2 Gm5714-201ENSMUST00000197343 566 ntBASIC15.03■□□□□ -0
Col23a1Q8K4G2 Gm3017-201ENSMUST00000203603 1126 ntBASIC15.03■□□□□ -0
Col23a1Q8K4G2 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC15.03■□□□□ -0
Col23a1Q8K4G2 Gm45856-201ENSMUST00000212752 416 ntBASIC15.03■□□□□ -0
Col23a1Q8K4G2 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC15.03■□□□□ -0
Col23a1Q8K4G2 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col23a1Q8K4G2 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Col23a1Q8K4G2 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Col23a1Q8K4G2 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Col23a1Q8K4G2 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Col23a1Q8K4G2 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Col23a1Q8K4G2 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col23a1Q8K4G2 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Col23a1Q8K4G2 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col23a1Q8K4G2 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col23a1Q8K4G2 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col23a1Q8K4G2 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col23a1Q8K4G2 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col23a1Q8K4G2 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC15.02■□□□□ -0
Col23a1Q8K4G2 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
Col23a1Q8K4G2 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col23a1Q8K4G2 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col23a1Q8K4G2 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC15.02■□□□□ -0
Col23a1Q8K4G2 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms