Protein–RNA interactions for Protein: Q8CII9

Crlf2, Cytokine receptor-like factor 2, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf2Q8CII9 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Crlf2Q8CII9 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Crlf2Q8CII9 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Crlf2Q8CII9 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Crlf2Q8CII9 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Crlf2Q8CII9 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Crlf2Q8CII9 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Crlf2Q8CII9 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Crlf2Q8CII9 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Crlf2Q8CII9 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Crlf2Q8CII9 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
Crlf2Q8CII9 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Crlf2Q8CII9 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Crlf2Q8CII9 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Crlf2Q8CII9 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Crlf2Q8CII9 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Crlf2Q8CII9 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Crlf2Q8CII9 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Crlf2Q8CII9 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Crlf2Q8CII9 Gm24791-201ENSMUST00000104284 131 ntBASIC13.38□□□□□ -0.27
Crlf2Q8CII9 Gm11422-201ENSMUST00000118925 1103 ntBASIC13.38□□□□□ -0.27
Crlf2Q8CII9 Gm15595-201ENSMUST00000120840 961 ntBASIC13.38□□□□□ -0.27
Crlf2Q8CII9 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC13.38□□□□□ -0.27
Crlf2Q8CII9 Gm24398-201ENSMUST00000157870 109 ntBASIC13.38□□□□□ -0.27
Crlf2Q8CII9 Gm15744-201ENSMUST00000161734 213 ntBASIC13.38□□□□□ -0.27
Crlf2Q8CII9 Gm8451-201ENSMUST00000170338 447 ntBASIC13.38□□□□□ -0.27
Crlf2Q8CII9 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Crlf2Q8CII9 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Crlf2Q8CII9 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Crlf2Q8CII9 Gm17798-201ENSMUST00000182282 1035 ntBASIC13.38□□□□□ -0.27
Crlf2Q8CII9 Rps2-ps12-201ENSMUST00000214262 785 ntBASIC13.38□□□□□ -0.27
Crlf2Q8CII9 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC13.38□□□□□ -0.27
Crlf2Q8CII9 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC13.38□□□□□ -0.27
Crlf2Q8CII9 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Crlf2Q8CII9 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC13.38□□□□□ -0.27
Crlf2Q8CII9 CT030135.2-201ENSMUST00000225255 893 ntBASIC13.38□□□□□ -0.27
Crlf2Q8CII9 AC102368.1-201ENSMUST00000227161 892 ntBASIC13.38□□□□□ -0.27
Crlf2Q8CII9 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Crlf2Q8CII9 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC13.38□□□□□ -0.27
Crlf2Q8CII9 Gm7536-201ENSMUST00000077389 444 ntBASIC13.38□□□□□ -0.27
Crlf2Q8CII9 Gm5453-201ENSMUST00000080866 447 ntBASIC13.38□□□□□ -0.27
Crlf2Q8CII9 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Crlf2Q8CII9 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Crlf2Q8CII9 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Crlf2Q8CII9 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Crlf2Q8CII9 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Crlf2Q8CII9 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Crlf2Q8CII9 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Crlf2Q8CII9 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Crlf2Q8CII9 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Crlf2Q8CII9 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Crlf2Q8CII9 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Crlf2Q8CII9 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Crlf2Q8CII9 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Crlf2Q8CII9 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Crlf2Q8CII9 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
Crlf2Q8CII9 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Crlf2Q8CII9 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Crlf2Q8CII9 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Crlf2Q8CII9 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Crlf2Q8CII9 Cd63-ps-202ENSMUST00000154992 717 ntBASIC13.37□□□□□ -0.27
Crlf2Q8CII9 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC13.37□□□□□ -0.27
Crlf2Q8CII9 Gm28686-201ENSMUST00000187404 609 ntBASIC13.37□□□□□ -0.27
Crlf2Q8CII9 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Crlf2Q8CII9 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Crlf2Q8CII9 Gm18706-201ENSMUST00000210053 1066 ntBASIC13.37□□□□□ -0.27
Crlf2Q8CII9 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Crlf2Q8CII9 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Crlf2Q8CII9 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Crlf2Q8CII9 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Crlf2Q8CII9 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Crlf2Q8CII9 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Crlf2Q8CII9 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Crlf2Q8CII9 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Crlf2Q8CII9 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Crlf2Q8CII9 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Crlf2Q8CII9 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Crlf2Q8CII9 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Crlf2Q8CII9 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Crlf2Q8CII9 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Crlf2Q8CII9 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Crlf2Q8CII9 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Crlf2Q8CII9 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Crlf2Q8CII9 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Crlf2Q8CII9 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Crlf2Q8CII9 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Crlf2Q8CII9 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.36□□□□□ -0.27
Crlf2Q8CII9 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Crlf2Q8CII9 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Crlf2Q8CII9 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Crlf2Q8CII9 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC13.36□□□□□ -0.27
Crlf2Q8CII9 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC13.36□□□□□ -0.27
Crlf2Q8CII9 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC13.36□□□□□ -0.27
Crlf2Q8CII9 Gm5870-201ENSMUST00000196461 282 ntBASIC13.36□□□□□ -0.27
Crlf2Q8CII9 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Crlf2Q8CII9 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Crlf2Q8CII9 Gm44647-201ENSMUST00000207402 428 ntBASIC13.36□□□□□ -0.27
Crlf2Q8CII9 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Crlf2Q8CII9 Olfr1347-205ENSMUST00000220413 964 ntBASIC13.36□□□□□ -0.27
Crlf2Q8CII9 AC151275.1-201ENSMUST00000224870 585 ntBASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms