Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
CopaQ8CIE6 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
CopaQ8CIE6 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
CopaQ8CIE6 Paupar-201ENSMUST00000194826 3482 ntBASIC12.83□□□□□ -0.35
CopaQ8CIE6 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.83□□□□□ -0.35
CopaQ8CIE6 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
CopaQ8CIE6 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CopaQ8CIE6 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
CopaQ8CIE6 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.83□□□□□ -0.36
CopaQ8CIE6 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
CopaQ8CIE6 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CopaQ8CIE6 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.83□□□□□ -0.36
CopaQ8CIE6 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
CopaQ8CIE6 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
CopaQ8CIE6 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
CopaQ8CIE6 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CopaQ8CIE6 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.83□□□□□ -0.36
CopaQ8CIE6 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CopaQ8CIE6 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CopaQ8CIE6 Gm6023-201ENSMUST00000118217 606 ntBASIC12.83□□□□□ -0.36
CopaQ8CIE6 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.83□□□□□ -0.36
CopaQ8CIE6 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.83□□□□□ -0.36
CopaQ8CIE6 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.83□□□□□ -0.36
CopaQ8CIE6 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CopaQ8CIE6 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
CopaQ8CIE6 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CopaQ8CIE6 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.83□□□□□ -0.36
CopaQ8CIE6 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.83□□□□□ -0.36
CopaQ8CIE6 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CopaQ8CIE6 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
CopaQ8CIE6 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.83□□□□□ -0.36
CopaQ8CIE6 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.83□□□□□ -0.36
CopaQ8CIE6 Gm45865-201ENSMUST00000211815 945 ntBASIC12.83□□□□□ -0.36
CopaQ8CIE6 Gm8227-201ENSMUST00000223306 571 ntBASIC12.83□□□□□ -0.36
CopaQ8CIE6 CT009713.10-202ENSMUST00000225734 696 ntBASIC12.83□□□□□ -0.36
CopaQ8CIE6 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CopaQ8CIE6 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CopaQ8CIE6 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CopaQ8CIE6 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CopaQ8CIE6 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CopaQ8CIE6 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
CopaQ8CIE6 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CopaQ8CIE6 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CopaQ8CIE6 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CopaQ8CIE6 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CopaQ8CIE6 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CopaQ8CIE6 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CopaQ8CIE6 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CopaQ8CIE6 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CopaQ8CIE6 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CopaQ8CIE6 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
CopaQ8CIE6 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
CopaQ8CIE6 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
CopaQ8CIE6 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CopaQ8CIE6 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CopaQ8CIE6 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CopaQ8CIE6 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.82□□□□□ -0.36
CopaQ8CIE6 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CopaQ8CIE6 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.82□□□□□ -0.36
CopaQ8CIE6 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CopaQ8CIE6 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CopaQ8CIE6 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CopaQ8CIE6 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CopaQ8CIE6 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CopaQ8CIE6 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CopaQ8CIE6 Gm12241-201ENSMUST00000118330 726 ntBASIC12.82□□□□□ -0.36
CopaQ8CIE6 Gm37042-201ENSMUST00000193816 581 ntBASIC12.82□□□□□ -0.36
CopaQ8CIE6 Gm38341-201ENSMUST00000195357 515 ntBASIC12.82□□□□□ -0.36
CopaQ8CIE6 Gm44364-201ENSMUST00000198368 141 ntBASIC12.82□□□□□ -0.36
CopaQ8CIE6 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CopaQ8CIE6 Gm6458-201ENSMUST00000211573 635 ntBASIC12.82□□□□□ -0.36
CopaQ8CIE6 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.82□□□□□ -0.36
CopaQ8CIE6 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.82□□□□□ -0.36
CopaQ8CIE6 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CopaQ8CIE6 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.82□□□□□ -0.36
CopaQ8CIE6 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CopaQ8CIE6 Gm24526-201ENSMUST00000082921 158 ntBASIC12.82□□□□□ -0.36
CopaQ8CIE6 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.82□□□□□ -0.36
CopaQ8CIE6 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CopaQ8CIE6 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CopaQ8CIE6 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CopaQ8CIE6 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
CopaQ8CIE6 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.82□□□□□ -0.36
CopaQ8CIE6 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
CopaQ8CIE6 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.82□□□□□ -0.36
CopaQ8CIE6 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CopaQ8CIE6 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CopaQ8CIE6 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CopaQ8CIE6 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CopaQ8CIE6 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
CopaQ8CIE6 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CopaQ8CIE6 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CopaQ8CIE6 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CopaQ8CIE6 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CopaQ8CIE6 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CopaQ8CIE6 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CopaQ8CIE6 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CopaQ8CIE6 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.82□□□□□ -0.36
CopaQ8CIE6 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CopaQ8CIE6 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms