Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
ShfQ8CG80 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
ShfQ8CG80 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
ShfQ8CG80 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
ShfQ8CG80 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
ShfQ8CG80 Gm11814-201ENSMUST00000119515 929 ntBASIC11.17□□□□□ -0.62
ShfQ8CG80 Gm13492-201ENSMUST00000119772 665 ntBASIC11.17□□□□□ -0.62
ShfQ8CG80 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
ShfQ8CG80 Gm11918-201ENSMUST00000121660 179 ntBASIC11.17□□□□□ -0.62
ShfQ8CG80 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
ShfQ8CG80 Gm4271-201ENSMUST00000174444 973 ntBASIC11.17□□□□□ -0.62
ShfQ8CG80 Auts2-212ENSMUST00000178555 309 ntBASIC11.17□□□□□ -0.62
ShfQ8CG80 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
ShfQ8CG80 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC11.17□□□□□ -0.62
ShfQ8CG80 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
ShfQ8CG80 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
ShfQ8CG80 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
ShfQ8CG80 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
ShfQ8CG80 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
ShfQ8CG80 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
ShfQ8CG80 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
ShfQ8CG80 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
ShfQ8CG80 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.17□□□□□ -0.62
ShfQ8CG80 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
ShfQ8CG80 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.17□□□□□ -0.62
ShfQ8CG80 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.17□□□□□ -0.62
ShfQ8CG80 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
ShfQ8CG80 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
ShfQ8CG80 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
ShfQ8CG80 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.17□□□□□ -0.62
ShfQ8CG80 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
ShfQ8CG80 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
ShfQ8CG80 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
ShfQ8CG80 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.17□□□□□ -0.62
ShfQ8CG80 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
ShfQ8CG80 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
ShfQ8CG80 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
ShfQ8CG80 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
ShfQ8CG80 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
ShfQ8CG80 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
ShfQ8CG80 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
ShfQ8CG80 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
ShfQ8CG80 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
ShfQ8CG80 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.16□□□□□ -0.62
ShfQ8CG80 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
ShfQ8CG80 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
ShfQ8CG80 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
ShfQ8CG80 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
ShfQ8CG80 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
ShfQ8CG80 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
ShfQ8CG80 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
ShfQ8CG80 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
ShfQ8CG80 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
ShfQ8CG80 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
ShfQ8CG80 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.16□□□□□ -0.62
ShfQ8CG80 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
ShfQ8CG80 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
ShfQ8CG80 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
ShfQ8CG80 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
ShfQ8CG80 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC11.16□□□□□ -0.62
ShfQ8CG80 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.16□□□□□ -0.62
ShfQ8CG80 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
ShfQ8CG80 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
ShfQ8CG80 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.16□□□□□ -0.62
ShfQ8CG80 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
ShfQ8CG80 AC154239.3-201ENSMUST00000226933 674 ntBASIC11.16□□□□□ -0.62
ShfQ8CG80 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
ShfQ8CG80 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
ShfQ8CG80 Gm5356-201ENSMUST00000093326 615 ntBASIC11.16□□□□□ -0.62
ShfQ8CG80 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
ShfQ8CG80 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
ShfQ8CG80 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
ShfQ8CG80 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
ShfQ8CG80 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
ShfQ8CG80 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
ShfQ8CG80 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
ShfQ8CG80 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
ShfQ8CG80 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.16□□□□□ -0.62
ShfQ8CG80 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.16□□□□□ -0.62
ShfQ8CG80 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.16□□□□□ -0.62
ShfQ8CG80 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
ShfQ8CG80 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
ShfQ8CG80 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
ShfQ8CG80 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
ShfQ8CG80 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
ShfQ8CG80 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC11.16□□□□□ -0.62
ShfQ8CG80 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
ShfQ8CG80 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
ShfQ8CG80 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
ShfQ8CG80 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
ShfQ8CG80 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.15□□□□□ -0.62
ShfQ8CG80 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.62
ShfQ8CG80 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
ShfQ8CG80 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
ShfQ8CG80 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
ShfQ8CG80 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
ShfQ8CG80 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
ShfQ8CG80 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
ShfQ8CG80 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
ShfQ8CG80 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms