Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps53Q8CCB4 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps53Q8CCB4 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC14.62□□□□□ -0.07
Vps53Q8CCB4 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps53Q8CCB4 Gm11637-201ENSMUST00000120601 592 ntBASIC14.62□□□□□ -0.07
Vps53Q8CCB4 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Vps53Q8CCB4 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC14.62□□□□□ -0.07
Vps53Q8CCB4 Gm7809-201ENSMUST00000153199 742 ntBASIC14.62□□□□□ -0.07
Vps53Q8CCB4 Gm17376-201ENSMUST00000166016 84 ntBASIC14.62□□□□□ -0.07
Vps53Q8CCB4 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC14.62□□□□□ -0.07
Vps53Q8CCB4 Gm21769-201ENSMUST00000211922 111 ntBASIC14.62□□□□□ -0.07
Vps53Q8CCB4 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Vps53Q8CCB4 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC14.62□□□□□ -0.07
Vps53Q8CCB4 Gm6082-201ENSMUST00000215204 454 ntBASIC14.62□□□□□ -0.07
Vps53Q8CCB4 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps53Q8CCB4 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Vps53Q8CCB4 AC154305.4-201ENSMUST00000224520 614 ntBASIC14.62□□□□□ -0.07
Vps53Q8CCB4 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps53Q8CCB4 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps53Q8CCB4 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Vps53Q8CCB4 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps53Q8CCB4 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps53Q8CCB4 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps53Q8CCB4 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Vps53Q8CCB4 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps53Q8CCB4 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Vps53Q8CCB4 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC14.62□□□□□ -0.07
Vps53Q8CCB4 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC14.62□□□□□ -0.07
Vps53Q8CCB4 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps53Q8CCB4 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps53Q8CCB4 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC14.62□□□□□ -0.07
Vps53Q8CCB4 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps53Q8CCB4 Zkscan3-207ENSMUST00000223831 2101 ntBASIC14.62□□□□□ -0.07
Vps53Q8CCB4 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Vps53Q8CCB4 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Vps53Q8CCB4 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps53Q8CCB4 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps53Q8CCB4 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Vps53Q8CCB4 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps53Q8CCB4 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Vps53Q8CCB4 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Vps53Q8CCB4 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps53Q8CCB4 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Vps53Q8CCB4 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Vps53Q8CCB4 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps53Q8CCB4 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Vps53Q8CCB4 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps53Q8CCB4 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Vps53Q8CCB4 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps53Q8CCB4 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC14.61□□□□□ -0.07
Vps53Q8CCB4 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps53Q8CCB4 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Vps53Q8CCB4 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps53Q8CCB4 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Vps53Q8CCB4 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Vps53Q8CCB4 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps53Q8CCB4 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps53Q8CCB4 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps53Q8CCB4 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps53Q8CCB4 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps53Q8CCB4 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Vps53Q8CCB4 Ntrk2-204ENSMUST00000224259 3049 ntBASIC14.6□□□□□ -0.07
Vps53Q8CCB4 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps53Q8CCB4 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC14.6□□□□□ -0.07
Vps53Q8CCB4 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Vps53Q8CCB4 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps53Q8CCB4 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Vps53Q8CCB4 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Vps53Q8CCB4 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps53Q8CCB4 Gm26616-202ENSMUST00000195676 3107 ntBASIC14.6□□□□□ -0.07
Vps53Q8CCB4 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps53Q8CCB4 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps53Q8CCB4 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps53Q8CCB4 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps53Q8CCB4 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps53Q8CCB4 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps53Q8CCB4 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps53Q8CCB4 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps53Q8CCB4 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Vps53Q8CCB4 Gm9061-201ENSMUST00000182707 1006 ntBASIC14.6□□□□□ -0.07
Vps53Q8CCB4 Gm28693-202ENSMUST00000190758 331 ntBASIC14.6□□□□□ -0.07
Vps53Q8CCB4 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Vps53Q8CCB4 Ighv8-10-201ENSMUST00000199579 358 ntBASIC14.6□□□□□ -0.07
Vps53Q8CCB4 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC14.6□□□□□ -0.07
Vps53Q8CCB4 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Vps53Q8CCB4 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps53Q8CCB4 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Vps53Q8CCB4 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Vps53Q8CCB4 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps53Q8CCB4 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps53Q8CCB4 Gm8793-201ENSMUST00000183069 1303 ntBASIC14.6□□□□□ -0.07
Vps53Q8CCB4 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Vps53Q8CCB4 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Vps53Q8CCB4 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps53Q8CCB4 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC14.6□□□□□ -0.07
Vps53Q8CCB4 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Vps53Q8CCB4 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vps53Q8CCB4 Gm3756-201ENSMUST00000169182 1355 ntBASIC14.6□□□□□ -0.07
Vps53Q8CCB4 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Vps53Q8CCB4 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms