Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lysmd4Q8CC84 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Lysmd4Q8CC84 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lysmd4Q8CC84 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lysmd4Q8CC84 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
Lysmd4Q8CC84 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Lysmd4Q8CC84 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lysmd4Q8CC84 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lysmd4Q8CC84 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lysmd4Q8CC84 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lysmd4Q8CC84 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lysmd4Q8CC84 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Lysmd4Q8CC84 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lysmd4Q8CC84 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC11.23□□□□□ -0.61
Lysmd4Q8CC84 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Lysmd4Q8CC84 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Lysmd4Q8CC84 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.23□□□□□ -0.61
Lysmd4Q8CC84 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lysmd4Q8CC84 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Lysmd4Q8CC84 Snord83b-201ENSMUST00000104546 94 ntBASIC11.23□□□□□ -0.61
Lysmd4Q8CC84 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lysmd4Q8CC84 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
Lysmd4Q8CC84 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lysmd4Q8CC84 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC11.23□□□□□ -0.61
Lysmd4Q8CC84 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Lysmd4Q8CC84 Gm5276-201ENSMUST00000196683 1047 ntBASIC11.23□□□□□ -0.61
Lysmd4Q8CC84 Cdk7-205ENSMUST00000225990 1159 ntBASIC11.23□□□□□ -0.61
Lysmd4Q8CC84 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lysmd4Q8CC84 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lysmd4Q8CC84 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Lysmd4Q8CC84 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Lysmd4Q8CC84 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Lysmd4Q8CC84 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Lysmd4Q8CC84 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lysmd4Q8CC84 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Lysmd4Q8CC84 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lysmd4Q8CC84 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.23□□□□□ -0.61
Lysmd4Q8CC84 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lysmd4Q8CC84 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Lysmd4Q8CC84 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Lysmd4Q8CC84 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lysmd4Q8CC84 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.23□□□□□ -0.61
Lysmd4Q8CC84 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lysmd4Q8CC84 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Lysmd4Q8CC84 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Lysmd4Q8CC84 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lysmd4Q8CC84 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lysmd4Q8CC84 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lysmd4Q8CC84 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lysmd4Q8CC84 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lysmd4Q8CC84 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lysmd4Q8CC84 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC11.22□□□□□ -0.61
Lysmd4Q8CC84 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Lysmd4Q8CC84 Gm11618-201ENSMUST00000117946 267 ntBASIC11.22□□□□□ -0.61
Lysmd4Q8CC84 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lysmd4Q8CC84 Gm13123-201ENSMUST00000122173 492 ntBASIC11.22□□□□□ -0.61
Lysmd4Q8CC84 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lysmd4Q8CC84 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lysmd4Q8CC84 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC11.22□□□□□ -0.61
Lysmd4Q8CC84 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Lysmd4Q8CC84 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lysmd4Q8CC84 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Lysmd4Q8CC84 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Lysmd4Q8CC84 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.22□□□□□ -0.61
Lysmd4Q8CC84 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC11.22□□□□□ -0.61
Lysmd4Q8CC84 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lysmd4Q8CC84 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.22□□□□□ -0.61
Lysmd4Q8CC84 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lysmd4Q8CC84 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Lysmd4Q8CC84 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Lysmd4Q8CC84 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Lysmd4Q8CC84 AC154687.2-201ENSMUST00000223853 640 ntBASIC11.22□□□□□ -0.61
Lysmd4Q8CC84 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.22□□□□□ -0.61
Lysmd4Q8CC84 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC11.22□□□□□ -0.61
Lysmd4Q8CC84 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lysmd4Q8CC84 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lysmd4Q8CC84 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Lysmd4Q8CC84 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lysmd4Q8CC84 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lysmd4Q8CC84 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lysmd4Q8CC84 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lysmd4Q8CC84 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lysmd4Q8CC84 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.22□□□□□ -0.61
Lysmd4Q8CC84 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lysmd4Q8CC84 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lysmd4Q8CC84 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lysmd4Q8CC84 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.21□□□□□ -0.61
Lysmd4Q8CC84 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.21□□□□□ -0.61
Lysmd4Q8CC84 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lysmd4Q8CC84 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.21□□□□□ -0.61
Lysmd4Q8CC84 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.21□□□□□ -0.61
Lysmd4Q8CC84 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lysmd4Q8CC84 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.21□□□□□ -0.61
Lysmd4Q8CC84 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lysmd4Q8CC84 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lysmd4Q8CC84 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Lysmd4Q8CC84 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Lysmd4Q8CC84 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lysmd4Q8CC84 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lysmd4Q8CC84 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms