Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rtp1Q8C8C1 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rtp1Q8C8C1 Gm23596-201ENSMUST00000104304 132 ntBASIC14.28□□□□□ -0.12
Rtp1Q8C8C1 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rtp1Q8C8C1 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rtp1Q8C8C1 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Rtp1Q8C8C1 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rtp1Q8C8C1 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rtp1Q8C8C1 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rtp1Q8C8C1 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rtp1Q8C8C1 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC14.28□□□□□ -0.12
Rtp1Q8C8C1 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rtp1Q8C8C1 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rtp1Q8C8C1 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rtp1Q8C8C1 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rtp1Q8C8C1 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Rtp1Q8C8C1 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rtp1Q8C8C1 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Rtp1Q8C8C1 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rtp1Q8C8C1 Gm42937-201ENSMUST00000197360 752 ntBASIC14.28□□□□□ -0.12
Rtp1Q8C8C1 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC14.28□□□□□ -0.12
Rtp1Q8C8C1 Gm43962-201ENSMUST00000203898 190 ntBASIC14.28□□□□□ -0.12
Rtp1Q8C8C1 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.28□□□□□ -0.12
Rtp1Q8C8C1 Grk6-205ENSMUST00000224653 2976 ntBASIC14.28□□□□□ -0.12
Rtp1Q8C8C1 AC154532.1-201ENSMUST00000227860 965 ntBASIC14.28□□□□□ -0.12
Rtp1Q8C8C1 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rtp1Q8C8C1 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rtp1Q8C8C1 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Rtp1Q8C8C1 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rtp1Q8C8C1 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Rtp1Q8C8C1 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rtp1Q8C8C1 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rtp1Q8C8C1 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rtp1Q8C8C1 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rtp1Q8C8C1 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rtp1Q8C8C1 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rtp1Q8C8C1 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rtp1Q8C8C1 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rtp1Q8C8C1 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rtp1Q8C8C1 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rtp1Q8C8C1 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rtp1Q8C8C1 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rtp1Q8C8C1 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC14.27□□□□□ -0.12
Rtp1Q8C8C1 Gm21998-201ENSMUST00000117552 1308 ntBASIC14.27□□□□□ -0.12
Rtp1Q8C8C1 Gm9387-201ENSMUST00000098624 1320 ntBASIC14.27□□□□□ -0.12
Rtp1Q8C8C1 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rtp1Q8C8C1 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Rtp1Q8C8C1 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rtp1Q8C8C1 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC14.27□□□□□ -0.13
Rtp1Q8C8C1 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rtp1Q8C8C1 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC14.27□□□□□ -0.13
Rtp1Q8C8C1 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC14.27□□□□□ -0.13
Rtp1Q8C8C1 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rtp1Q8C8C1 Gm6771-201ENSMUST00000182716 1001 ntBASIC14.27□□□□□ -0.13
Rtp1Q8C8C1 Mir6998-201ENSMUST00000183343 64 ntBASIC14.27□□□□□ -0.13
Rtp1Q8C8C1 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rtp1Q8C8C1 Gm3793-201ENSMUST00000204973 672 ntBASIC14.27□□□□□ -0.13
Rtp1Q8C8C1 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC14.27□□□□□ -0.13
Rtp1Q8C8C1 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rtp1Q8C8C1 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC14.27□□□□□ -0.13
Rtp1Q8C8C1 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Rtp1Q8C8C1 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rtp1Q8C8C1 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC14.27□□□□□ -0.13
Rtp1Q8C8C1 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rtp1Q8C8C1 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rtp1Q8C8C1 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rtp1Q8C8C1 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rtp1Q8C8C1 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rtp1Q8C8C1 Gm45706-201ENSMUST00000213063 2136 ntBASIC14.27□□□□□ -0.13
Rtp1Q8C8C1 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rtp1Q8C8C1 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rtp1Q8C8C1 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Rtp1Q8C8C1 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rtp1Q8C8C1 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rtp1Q8C8C1 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC14.27□□□□□ -0.13
Rtp1Q8C8C1 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rtp1Q8C8C1 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rtp1Q8C8C1 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rtp1Q8C8C1 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rtp1Q8C8C1 Gm44401-201ENSMUST00000204462 2375 ntBASIC14.26□□□□□ -0.13
Rtp1Q8C8C1 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rtp1Q8C8C1 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rtp1Q8C8C1 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rtp1Q8C8C1 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rtp1Q8C8C1 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rtp1Q8C8C1 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rtp1Q8C8C1 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.26□□□□□ -0.13
Rtp1Q8C8C1 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rtp1Q8C8C1 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rtp1Q8C8C1 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC14.26□□□□□ -0.13
Rtp1Q8C8C1 Gm11989-201ENSMUST00000117240 672 ntBASIC14.26□□□□□ -0.13
Rtp1Q8C8C1 Gm11362-201ENSMUST00000118838 850 ntBASIC14.26□□□□□ -0.13
Rtp1Q8C8C1 Gm12628-201ENSMUST00000122193 382 ntBASIC14.26□□□□□ -0.13
Rtp1Q8C8C1 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC14.26□□□□□ -0.13
Rtp1Q8C8C1 Gm22138-201ENSMUST00000158748 128 ntBASIC14.26□□□□□ -0.13
Rtp1Q8C8C1 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rtp1Q8C8C1 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC14.26□□□□□ -0.13
Rtp1Q8C8C1 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC14.26□□□□□ -0.13
Rtp1Q8C8C1 Gm2517-201ENSMUST00000215651 348 ntBASIC14.26□□□□□ -0.13
Rtp1Q8C8C1 AC154290.1-201ENSMUST00000223786 1240 ntBASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms