Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.71□□□□□ -0.37
Sh3rf2Q8BZT2 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Sh3rf2Q8BZT2 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Sh3rf2Q8BZT2 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sh3rf2Q8BZT2 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Sh3rf2Q8BZT2 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sh3rf2Q8BZT2 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sh3rf2Q8BZT2 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sh3rf2Q8BZT2 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sh3rf2Q8BZT2 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Sh3rf2Q8BZT2 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sh3rf2Q8BZT2 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sh3rf2Q8BZT2 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.71□□□□□ -0.37
Sh3rf2Q8BZT2 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC12.71□□□□□ -0.37
Sh3rf2Q8BZT2 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sh3rf2Q8BZT2 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sh3rf2Q8BZT2 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Sh3rf2Q8BZT2 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Sh3rf2Q8BZT2 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.71□□□□□ -0.37
Sh3rf2Q8BZT2 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.71□□□□□ -0.37
Sh3rf2Q8BZT2 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sh3rf2Q8BZT2 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
Sh3rf2Q8BZT2 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.71□□□□□ -0.37
Sh3rf2Q8BZT2 Gm9022-201ENSMUST00000182482 992 ntBASIC12.71□□□□□ -0.37
Sh3rf2Q8BZT2 Gm18304-201ENSMUST00000189162 546 ntBASIC12.71□□□□□ -0.37
Sh3rf2Q8BZT2 Gm9445-201ENSMUST00000207454 1285 ntBASIC12.71□□□□□ -0.37
Sh3rf2Q8BZT2 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.71□□□□□ -0.37
Sh3rf2Q8BZT2 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Sh3rf2Q8BZT2 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Sh3rf2Q8BZT2 Gm8913-201ENSMUST00000209491 641 ntBASIC12.71□□□□□ -0.37
Sh3rf2Q8BZT2 Gm18041-201ENSMUST00000218210 618 ntBASIC12.71□□□□□ -0.37
Sh3rf2Q8BZT2 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sh3rf2Q8BZT2 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.71□□□□□ -0.37
Sh3rf2Q8BZT2 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sh3rf2Q8BZT2 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sh3rf2Q8BZT2 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sh3rf2Q8BZT2 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Sh3rf2Q8BZT2 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.71□□□□□ -0.37
Sh3rf2Q8BZT2 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Sh3rf2Q8BZT2 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.71□□□□□ -0.38
Sh3rf2Q8BZT2 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sh3rf2Q8BZT2 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Sh3rf2Q8BZT2 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.71□□□□□ -0.38
Sh3rf2Q8BZT2 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sh3rf2Q8BZT2 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.71□□□□□ -0.38
Sh3rf2Q8BZT2 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Sh3rf2Q8BZT2 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Sh3rf2Q8BZT2 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.71□□□□□ -0.38
Sh3rf2Q8BZT2 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sh3rf2Q8BZT2 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Sh3rf2Q8BZT2 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.71□□□□□ -0.38
Sh3rf2Q8BZT2 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Sh3rf2Q8BZT2 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Sh3rf2Q8BZT2 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.71□□□□□ -0.38
Sh3rf2Q8BZT2 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Sh3rf2Q8BZT2 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sh3rf2Q8BZT2 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Sh3rf2Q8BZT2 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Sh3rf2Q8BZT2 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sh3rf2Q8BZT2 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sh3rf2Q8BZT2 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sh3rf2Q8BZT2 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sh3rf2Q8BZT2 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Sh3rf2Q8BZT2 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sh3rf2Q8BZT2 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sh3rf2Q8BZT2 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sh3rf2Q8BZT2 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sh3rf2Q8BZT2 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.7□□□□□ -0.38
Sh3rf2Q8BZT2 Gm24231-201ENSMUST00000104315 133 ntBASIC12.7□□□□□ -0.38
Sh3rf2Q8BZT2 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Sh3rf2Q8BZT2 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.7□□□□□ -0.38
Sh3rf2Q8BZT2 Gm4909-201ENSMUST00000118749 794 ntBASIC12.7□□□□□ -0.38
Sh3rf2Q8BZT2 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.7□□□□□ -0.38
Sh3rf2Q8BZT2 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC12.7□□□□□ -0.38
Sh3rf2Q8BZT2 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sh3rf2Q8BZT2 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sh3rf2Q8BZT2 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC12.7□□□□□ -0.38
Sh3rf2Q8BZT2 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Sh3rf2Q8BZT2 Gm32999-201ENSMUST00000192693 562 ntBASIC12.7□□□□□ -0.38
Sh3rf2Q8BZT2 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.7□□□□□ -0.38
Sh3rf2Q8BZT2 Gm19208-201ENSMUST00000213861 912 ntBASIC12.7□□□□□ -0.38
Sh3rf2Q8BZT2 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sh3rf2Q8BZT2 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.7□□□□□ -0.38
Sh3rf2Q8BZT2 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sh3rf2Q8BZT2 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sh3rf2Q8BZT2 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sh3rf2Q8BZT2 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sh3rf2Q8BZT2 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sh3rf2Q8BZT2 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sh3rf2Q8BZT2 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sh3rf2Q8BZT2 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sh3rf2Q8BZT2 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sh3rf2Q8BZT2 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Sh3rf2Q8BZT2 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sh3rf2Q8BZT2 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sh3rf2Q8BZT2 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sh3rf2Q8BZT2 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Sh3rf2Q8BZT2 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sh3rf2Q8BZT2 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sh3rf2Q8BZT2 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms