Protein–RNA interactions for Protein: Q80XC6

Nrde2, Protein NRDE2 homolog, mousemouse

Predictions only

Length 1,172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nrde2Q80XC6 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nrde2Q80XC6 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.84□□□□□ -0.35
Nrde2Q80XC6 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nrde2Q80XC6 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nrde2Q80XC6 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Nrde2Q80XC6 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Nrde2Q80XC6 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.84□□□□□ -0.35
Nrde2Q80XC6 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.84□□□□□ -0.35
Nrde2Q80XC6 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nrde2Q80XC6 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
Nrde2Q80XC6 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nrde2Q80XC6 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Nrde2Q80XC6 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nrde2Q80XC6 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.84□□□□□ -0.35
Nrde2Q80XC6 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.84□□□□□ -0.35
Nrde2Q80XC6 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Nrde2Q80XC6 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nrde2Q80XC6 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nrde2Q80XC6 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nrde2Q80XC6 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.84□□□□□ -0.35
Nrde2Q80XC6 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC12.84□□□□□ -0.35
Nrde2Q80XC6 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nrde2Q80XC6 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC12.84□□□□□ -0.35
Nrde2Q80XC6 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.84□□□□□ -0.35
Nrde2Q80XC6 Gm5950-201ENSMUST00000213337 772 ntBASIC12.84□□□□□ -0.35
Nrde2Q80XC6 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.84□□□□□ -0.35
Nrde2Q80XC6 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nrde2Q80XC6 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nrde2Q80XC6 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nrde2Q80XC6 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nrde2Q80XC6 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nrde2Q80XC6 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nrde2Q80XC6 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
Nrde2Q80XC6 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.84□□□□□ -0.35
Nrde2Q80XC6 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.84□□□□□ -0.35
Nrde2Q80XC6 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nrde2Q80XC6 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nrde2Q80XC6 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nrde2Q80XC6 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nrde2Q80XC6 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nrde2Q80XC6 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nrde2Q80XC6 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nrde2Q80XC6 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nrde2Q80XC6 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nrde2Q80XC6 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nrde2Q80XC6 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nrde2Q80XC6 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nrde2Q80XC6 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nrde2Q80XC6 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Nrde2Q80XC6 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.83□□□□□ -0.35
Nrde2Q80XC6 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Nrde2Q80XC6 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Nrde2Q80XC6 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Nrde2Q80XC6 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.35
Nrde2Q80XC6 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Nrde2Q80XC6 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nrde2Q80XC6 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nrde2Q80XC6 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nrde2Q80XC6 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nrde2Q80XC6 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nrde2Q80XC6 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nrde2Q80XC6 Gm13492-201ENSMUST00000119772 665 ntBASIC12.83□□□□□ -0.36
Nrde2Q80XC6 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nrde2Q80XC6 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Nrde2Q80XC6 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.83□□□□□ -0.36
Nrde2Q80XC6 Gm3096-201ENSMUST00000185770 364 ntBASIC12.83□□□□□ -0.36
Nrde2Q80XC6 Gm8099-201ENSMUST00000200510 742 ntBASIC12.83□□□□□ -0.36
Nrde2Q80XC6 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.83□□□□□ -0.36
Nrde2Q80XC6 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.83□□□□□ -0.36
Nrde2Q80XC6 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
Nrde2Q80XC6 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nrde2Q80XC6 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nrde2Q80XC6 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nrde2Q80XC6 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nrde2Q80XC6 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nrde2Q80XC6 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Nrde2Q80XC6 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.83□□□□□ -0.36
Nrde2Q80XC6 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nrde2Q80XC6 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nrde2Q80XC6 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nrde2Q80XC6 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nrde2Q80XC6 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.83□□□□□ -0.36
Nrde2Q80XC6 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Nrde2Q80XC6 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.83□□□□□ -0.36
Nrde2Q80XC6 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Nrde2Q80XC6 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nrde2Q80XC6 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nrde2Q80XC6 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nrde2Q80XC6 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nrde2Q80XC6 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nrde2Q80XC6 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nrde2Q80XC6 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nrde2Q80XC6 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Nrde2Q80XC6 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nrde2Q80XC6 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nrde2Q80XC6 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nrde2Q80XC6 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nrde2Q80XC6 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nrde2Q80XC6 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nrde2Q80XC6 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms