Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Scn9aQ62205 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Scn9aQ62205 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC14.47□□□□□ -0.09
Scn9aQ62205 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC14.47□□□□□ -0.09
Scn9aQ62205 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scn9aQ62205 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scn9aQ62205 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC14.47□□□□□ -0.09
Scn9aQ62205 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC14.47□□□□□ -0.09
Scn9aQ62205 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Scn9aQ62205 Gm18367-201ENSMUST00000176139 600 ntBASIC14.47□□□□□ -0.09
Scn9aQ62205 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC14.47□□□□□ -0.09
Scn9aQ62205 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Scn9aQ62205 Gm25201-201ENSMUST00000083093 170 ntBASIC14.47□□□□□ -0.09
Scn9aQ62205 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scn9aQ62205 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scn9aQ62205 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scn9aQ62205 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Scn9aQ62205 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Scn9aQ62205 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scn9aQ62205 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC14.47□□□□□ -0.09
Scn9aQ62205 Gm37859-201ENSMUST00000195529 2173 ntBASIC14.47□□□□□ -0.09
Scn9aQ62205 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scn9aQ62205 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scn9aQ62205 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scn9aQ62205 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scn9aQ62205 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scn9aQ62205 Gm12419-201ENSMUST00000116649 636 ntBASIC14.47□□□□□ -0.09
Scn9aQ62205 Gm4862-201ENSMUST00000170405 438 ntBASIC14.47□□□□□ -0.09
Scn9aQ62205 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC14.47□□□□□ -0.09
Scn9aQ62205 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC14.47□□□□□ -0.09
Scn9aQ62205 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scn9aQ62205 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Scn9aQ62205 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scn9aQ62205 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Scn9aQ62205 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Scn9aQ62205 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scn9aQ62205 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scn9aQ62205 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scn9aQ62205 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scn9aQ62205 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scn9aQ62205 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC14.46□□□□□ -0.09
Scn9aQ62205 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Scn9aQ62205 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scn9aQ62205 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Scn9aQ62205 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Scn9aQ62205 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC14.46□□□□□ -0.09
Scn9aQ62205 Gm3150-201ENSMUST00000166418 204 ntBASIC14.46□□□□□ -0.09
Scn9aQ62205 Gm4654-201ENSMUST00000183305 982 ntBASIC14.46□□□□□ -0.09
Scn9aQ62205 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC14.46□□□□□ -0.09
Scn9aQ62205 Mt1-202ENSMUST00000211807 1085 ntBASIC14.46□□□□□ -0.09
Scn9aQ62205 AC154257.1-202ENSMUST00000224729 843 ntBASIC14.46□□□□□ -0.09
Scn9aQ62205 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scn9aQ62205 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scn9aQ62205 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Scn9aQ62205 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scn9aQ62205 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scn9aQ62205 Gm18227-201ENSMUST00000211082 1468 ntBASIC14.46□□□□□ -0.09
Scn9aQ62205 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC14.46□□□□□ -0.09
Scn9aQ62205 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scn9aQ62205 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scn9aQ62205 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.46□□□□□ -0.09
Scn9aQ62205 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Scn9aQ62205 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Scn9aQ62205 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC14.46□□□□□ -0.1
Scn9aQ62205 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Scn9aQ62205 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Scn9aQ62205 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Scn9aQ62205 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC14.45□□□□□ -0.1
Scn9aQ62205 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC14.45□□□□□ -0.1
Scn9aQ62205 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC14.45□□□□□ -0.1
Scn9aQ62205 Gm5714-201ENSMUST00000197343 566 ntBASIC14.45□□□□□ -0.1
Scn9aQ62205 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC14.45□□□□□ -0.1
Scn9aQ62205 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn9aQ62205 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC14.45□□□□□ -0.1
Scn9aQ62205 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC14.45□□□□□ -0.1
Scn9aQ62205 AC121960.1-201ENSMUST00000227982 564 ntBASIC14.45□□□□□ -0.1
Scn9aQ62205 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Scn9aQ62205 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn9aQ62205 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Scn9aQ62205 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Scn9aQ62205 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn9aQ62205 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Scn9aQ62205 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Scn9aQ62205 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn9aQ62205 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn9aQ62205 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Scn9aQ62205 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn9aQ62205 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC14.45□□□□□ -0.1
Scn9aQ62205 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn9aQ62205 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn9aQ62205 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC14.45□□□□□ -0.1
Scn9aQ62205 AC126257.1-201ENSMUST00000213195 1536 ntBASIC14.45□□□□□ -0.1
Scn9aQ62205 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn9aQ62205 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn9aQ62205 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn9aQ62205 Mir671-201ENSMUST00000102432 98 ntBASIC14.45□□□□□ -0.1
Scn9aQ62205 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn9aQ62205 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC14.45□□□□□ -0.1
Scn9aQ62205 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC14.45□□□□□ -0.1
Scn9aQ62205 Gm8531-201ENSMUST00000188319 893 ntBASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms