Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rai1Q61818 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rai1Q61818 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rai1Q61818 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rai1Q61818 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rai1Q61818 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rai1Q61818 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Rai1Q61818 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rai1Q61818 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rai1Q61818 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rai1Q61818 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rai1Q61818 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Rai1Q61818 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rai1Q61818 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rai1Q61818 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rai1Q61818 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.95□□□□□ -0.5
Rai1Q61818 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rai1Q61818 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rai1Q61818 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rai1Q61818 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Rai1Q61818 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rai1Q61818 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC11.95□□□□□ -0.5
Rai1Q61818 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC11.95□□□□□ -0.5
Rai1Q61818 Gm5733-201ENSMUST00000190232 939 ntBASIC11.95□□□□□ -0.5
Rai1Q61818 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC11.95□□□□□ -0.5
Rai1Q61818 Gm17831-201ENSMUST00000205579 900 ntBASIC11.95□□□□□ -0.5
Rai1Q61818 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.95□□□□□ -0.5
Rai1Q61818 Gm45398-201ENSMUST00000210561 165 ntBASIC11.95□□□□□ -0.5
Rai1Q61818 CT030637.1-201ENSMUST00000228016 669 ntBASIC11.95□□□□□ -0.5
Rai1Q61818 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Rai1Q61818 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rai1Q61818 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Rai1Q61818 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rai1Q61818 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rai1Q61818 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
Rai1Q61818 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC11.94□□□□□ -0.5
Rai1Q61818 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rai1Q61818 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rai1Q61818 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Rai1Q61818 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rai1Q61818 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rai1Q61818 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rai1Q61818 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rai1Q61818 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
Rai1Q61818 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rai1Q61818 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rai1Q61818 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rai1Q61818 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Rai1Q61818 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rai1Q61818 AC171241.1-201ENSMUST00000228144 1166 ntBASIC11.94□□□□□ -0.5
Rai1Q61818 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rai1Q61818 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Rai1Q61818 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rai1Q61818 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rai1Q61818 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rai1Q61818 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rai1Q61818 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rai1Q61818 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rai1Q61818 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rai1Q61818 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC11.94□□□□□ -0.5
Rai1Q61818 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rai1Q61818 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.94□□□□□ -0.5
Rai1Q61818 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rai1Q61818 AC169511.2-201ENSMUST00000226674 2063 ntBASIC11.94□□□□□ -0.5
Rai1Q61818 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.94□□□□□ -0.5
Rai1Q61818 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rai1Q61818 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.94□□□□□ -0.5
Rai1Q61818 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rai1Q61818 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rai1Q61818 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rai1Q61818 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rai1Q61818 Gm15725-201ENSMUST00000119947 1090 ntBASIC11.93□□□□□ -0.5
Rai1Q61818 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rai1Q61818 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rai1Q61818 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rai1Q61818 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rai1Q61818 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rai1Q61818 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Rai1Q61818 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
Rai1Q61818 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rai1Q61818 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rai1Q61818 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rai1Q61818 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rai1Q61818 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rai1Q61818 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rai1Q61818 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rai1Q61818 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rai1Q61818 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Rai1Q61818 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.93□□□□□ -0.5
Rai1Q61818 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.93□□□□□ -0.5
Rai1Q61818 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rai1Q61818 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rai1Q61818 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.93□□□□□ -0.5
Rai1Q61818 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rai1Q61818 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rai1Q61818 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rai1Q61818 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rai1Q61818 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rai1Q61818 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rai1Q61818 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms