Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.05□□□□□ -0.48
ClpbQ60649 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.05□□□□□ -0.48
ClpbQ60649 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
ClpbQ60649 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
ClpbQ60649 Gm11591-201ENSMUST00000120063 702 ntBASIC12.05□□□□□ -0.48
ClpbQ60649 Gm12291-201ENSMUST00000121627 311 ntBASIC12.05□□□□□ -0.48
ClpbQ60649 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.05□□□□□ -0.48
ClpbQ60649 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.05□□□□□ -0.48
ClpbQ60649 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.05□□□□□ -0.48
ClpbQ60649 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.05□□□□□ -0.48
ClpbQ60649 Gm8099-201ENSMUST00000200510 742 ntBASIC12.05□□□□□ -0.48
ClpbQ60649 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.05□□□□□ -0.48
ClpbQ60649 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
ClpbQ60649 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
ClpbQ60649 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
ClpbQ60649 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
ClpbQ60649 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
ClpbQ60649 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ClpbQ60649 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
ClpbQ60649 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
ClpbQ60649 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ClpbQ60649 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
ClpbQ60649 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
ClpbQ60649 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ClpbQ60649 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
ClpbQ60649 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.05□□□□□ -0.48
ClpbQ60649 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.05□□□□□ -0.48
ClpbQ60649 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
ClpbQ60649 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
ClpbQ60649 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
ClpbQ60649 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ClpbQ60649 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ClpbQ60649 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ClpbQ60649 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ClpbQ60649 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ClpbQ60649 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.04□□□□□ -0.48
ClpbQ60649 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.04□□□□□ -0.48
ClpbQ60649 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ClpbQ60649 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
ClpbQ60649 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.04□□□□□ -0.48
ClpbQ60649 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.04□□□□□ -0.48
ClpbQ60649 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ClpbQ60649 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
ClpbQ60649 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ClpbQ60649 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ClpbQ60649 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ClpbQ60649 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
ClpbQ60649 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
ClpbQ60649 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
ClpbQ60649 Gm15198-201ENSMUST00000117283 177 ntBASIC12.04□□□□□ -0.48
ClpbQ60649 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.04□□□□□ -0.48
ClpbQ60649 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
ClpbQ60649 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ClpbQ60649 Gm6222-202ENSMUST00000182143 629 ntBASIC12.04□□□□□ -0.48
ClpbQ60649 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
ClpbQ60649 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
ClpbQ60649 Gm43179-201ENSMUST00000198797 275 ntBASIC12.04□□□□□ -0.48
ClpbQ60649 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.04□□□□□ -0.48
ClpbQ60649 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ClpbQ60649 Gm5781-201ENSMUST00000219792 443 ntBASIC12.04□□□□□ -0.48
ClpbQ60649 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ClpbQ60649 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ClpbQ60649 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
ClpbQ60649 Olfr582-201ENSMUST00000098212 960 ntBASIC12.04□□□□□ -0.48
ClpbQ60649 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ClpbQ60649 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ClpbQ60649 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ClpbQ60649 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ClpbQ60649 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.04□□□□□ -0.48
ClpbQ60649 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
ClpbQ60649 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.04□□□□□ -0.48
ClpbQ60649 Matn2-203ENSMUST00000226766 3252 ntBASIC12.04□□□□□ -0.48
ClpbQ60649 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ClpbQ60649 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ClpbQ60649 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ClpbQ60649 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
ClpbQ60649 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ClpbQ60649 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
ClpbQ60649 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.03□□□□□ -0.48
ClpbQ60649 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
ClpbQ60649 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ClpbQ60649 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.03□□□□□ -0.48
ClpbQ60649 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClpbQ60649 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ClpbQ60649 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
ClpbQ60649 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ClpbQ60649 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.03□□□□□ -0.48
ClpbQ60649 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ClpbQ60649 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClpbQ60649 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClpbQ60649 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClpbQ60649 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ClpbQ60649 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
ClpbQ60649 Gm14704-201ENSMUST00000120300 874 ntBASIC12.03□□□□□ -0.48
ClpbQ60649 Gm11793-201ENSMUST00000120433 981 ntBASIC12.03□□□□□ -0.48
ClpbQ60649 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.03□□□□□ -0.48
ClpbQ60649 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.03□□□□□ -0.48
ClpbQ60649 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ClpbQ60649 Gm7809-201ENSMUST00000153199 742 ntBASIC12.03□□□□□ -0.48
ClpbQ60649 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms