Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC13.36□□□□□ -0.27
Shroom1Q5SX79 Gm2260-201ENSMUST00000184965 657 ntBASIC13.36□□□□□ -0.27
Shroom1Q5SX79 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC13.36□□□□□ -0.27
Shroom1Q5SX79 Gm37201-201ENSMUST00000191845 523 ntBASIC13.36□□□□□ -0.27
Shroom1Q5SX79 Gm18753-201ENSMUST00000201000 566 ntBASIC13.36□□□□□ -0.27
Shroom1Q5SX79 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shroom1Q5SX79 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Shroom1Q5SX79 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC13.36□□□□□ -0.27
Shroom1Q5SX79 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC13.36□□□□□ -0.27
Shroom1Q5SX79 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Shroom1Q5SX79 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC13.36□□□□□ -0.27
Shroom1Q5SX79 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC13.36□□□□□ -0.27
Shroom1Q5SX79 AC161537.1-201ENSMUST00000226199 1015 ntBASIC13.36□□□□□ -0.27
Shroom1Q5SX79 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shroom1Q5SX79 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shroom1Q5SX79 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Shroom1Q5SX79 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shroom1Q5SX79 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shroom1Q5SX79 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Shroom1Q5SX79 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Shroom1Q5SX79 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shroom1Q5SX79 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shroom1Q5SX79 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shroom1Q5SX79 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shroom1Q5SX79 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shroom1Q5SX79 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Shroom1Q5SX79 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Shroom1Q5SX79 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shroom1Q5SX79 Gm2673-201ENSMUST00000120958 1608 ntBASIC13.35□□□□□ -0.27
Shroom1Q5SX79 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.35□□□□□ -0.27
Shroom1Q5SX79 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Shroom1Q5SX79 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shroom1Q5SX79 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Shroom1Q5SX79 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shroom1Q5SX79 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shroom1Q5SX79 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shroom1Q5SX79 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC13.35□□□□□ -0.27
Shroom1Q5SX79 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC13.35□□□□□ -0.27
Shroom1Q5SX79 Gm11439-201ENSMUST00000118598 409 ntBASIC13.35□□□□□ -0.27
Shroom1Q5SX79 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Shroom1Q5SX79 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Shroom1Q5SX79 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC13.35□□□□□ -0.27
Shroom1Q5SX79 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC13.35□□□□□ -0.27
Shroom1Q5SX79 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Shroom1Q5SX79 AC155637.1-201ENSMUST00000218560 636 ntBASIC13.35□□□□□ -0.27
Shroom1Q5SX79 Gm8712-201ENSMUST00000221090 701 ntBASIC13.35□□□□□ -0.27
Shroom1Q5SX79 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shroom1Q5SX79 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shroom1Q5SX79 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shroom1Q5SX79 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Shroom1Q5SX79 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Shroom1Q5SX79 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shroom1Q5SX79 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shroom1Q5SX79 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shroom1Q5SX79 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Shroom1Q5SX79 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shroom1Q5SX79 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shroom1Q5SX79 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shroom1Q5SX79 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Shroom1Q5SX79 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Shroom1Q5SX79 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC13.35□□□□□ -0.27
Shroom1Q5SX79 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC13.35□□□□□ -0.27
Shroom1Q5SX79 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shroom1Q5SX79 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Shroom1Q5SX79 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Shroom1Q5SX79 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shroom1Q5SX79 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shroom1Q5SX79 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.34□□□□□ -0.27
Shroom1Q5SX79 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shroom1Q5SX79 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Shroom1Q5SX79 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shroom1Q5SX79 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shroom1Q5SX79 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shroom1Q5SX79 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shroom1Q5SX79 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.34□□□□□ -0.27
Shroom1Q5SX79 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shroom1Q5SX79 Gm4909-201ENSMUST00000118749 794 ntBASIC13.34□□□□□ -0.27
Shroom1Q5SX79 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC13.34□□□□□ -0.27
Shroom1Q5SX79 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Shroom1Q5SX79 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC13.34□□□□□ -0.27
Shroom1Q5SX79 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Shroom1Q5SX79 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC13.34□□□□□ -0.27
Shroom1Q5SX79 Gm9445-201ENSMUST00000207454 1285 ntBASIC13.34□□□□□ -0.27
Shroom1Q5SX79 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC13.34□□□□□ -0.27
Shroom1Q5SX79 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.34□□□□□ -0.27
Shroom1Q5SX79 AC108416.1-202ENSMUST00000228927 1201 ntBASIC13.34□□□□□ -0.27
Shroom1Q5SX79 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shroom1Q5SX79 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shroom1Q5SX79 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Shroom1Q5SX79 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Shroom1Q5SX79 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Shroom1Q5SX79 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Shroom1Q5SX79 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Shroom1Q5SX79 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shroom1Q5SX79 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Shroom1Q5SX79 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shroom1Q5SX79 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shroom1Q5SX79 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shroom1Q5SX79 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shroom1Q5SX79 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms