Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav5d-4Q5R1F6 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav5d-4Q5R1F6 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav5d-4Q5R1F6 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.69
Trav5d-4Q5R1F6 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav5d-4Q5R1F6 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC10.77□□□□□ -0.69
Trav5d-4Q5R1F6 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Trav5d-4Q5R1F6 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
Trav5d-4Q5R1F6 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC10.77□□□□□ -0.69
Trav5d-4Q5R1F6 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Trav5d-4Q5R1F6 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav5d-4Q5R1F6 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC10.77□□□□□ -0.69
Trav5d-4Q5R1F6 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav5d-4Q5R1F6 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav5d-4Q5R1F6 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC10.77□□□□□ -0.69
Trav5d-4Q5R1F6 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav5d-4Q5R1F6 Gm38092-201ENSMUST00000195600 653 ntBASIC10.77□□□□□ -0.69
Trav5d-4Q5R1F6 Tyms-ps-201ENSMUST00000219550 915 ntBASIC10.77□□□□□ -0.69
Trav5d-4Q5R1F6 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav5d-4Q5R1F6 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav5d-4Q5R1F6 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav5d-4Q5R1F6 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav5d-4Q5R1F6 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Trav5d-4Q5R1F6 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav5d-4Q5R1F6 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav5d-4Q5R1F6 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Trav5d-4Q5R1F6 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav5d-4Q5R1F6 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC10.77□□□□□ -0.69
Trav5d-4Q5R1F6 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Trav5d-4Q5R1F6 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav5d-4Q5R1F6 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav5d-4Q5R1F6 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav5d-4Q5R1F6 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav5d-4Q5R1F6 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC10.77□□□□□ -0.69
Trav5d-4Q5R1F6 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav5d-4Q5R1F6 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav5d-4Q5R1F6 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav5d-4Q5R1F6 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav5d-4Q5R1F6 Gm42480-201ENSMUST00000198434 2595 ntBASIC10.76□□□□□ -0.69
Trav5d-4Q5R1F6 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav5d-4Q5R1F6 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav5d-4Q5R1F6 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav5d-4Q5R1F6 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav5d-4Q5R1F6 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Trav5d-4Q5R1F6 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Trav5d-4Q5R1F6 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav5d-4Q5R1F6 Gm8706-201ENSMUST00000197372 1491 ntBASIC10.76□□□□□ -0.69
Trav5d-4Q5R1F6 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav5d-4Q5R1F6 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav5d-4Q5R1F6 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav5d-4Q5R1F6 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC10.76□□□□□ -0.69
Trav5d-4Q5R1F6 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav5d-4Q5R1F6 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Trav5d-4Q5R1F6 Gm2639-201ENSMUST00000156881 1297 ntBASIC10.76□□□□□ -0.69
Trav5d-4Q5R1F6 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC10.76□□□□□ -0.69
Trav5d-4Q5R1F6 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav5d-4Q5R1F6 Gm6266-201ENSMUST00000203844 806 ntBASIC10.76□□□□□ -0.69
Trav5d-4Q5R1F6 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC10.76□□□□□ -0.69
Trav5d-4Q5R1F6 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC10.76□□□□□ -0.69
Trav5d-4Q5R1F6 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav5d-4Q5R1F6 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav5d-4Q5R1F6 Gm24526-201ENSMUST00000082921 158 ntBASIC10.76□□□□□ -0.69
Trav5d-4Q5R1F6 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav5d-4Q5R1F6 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC10.76□□□□□ -0.69
Trav5d-4Q5R1F6 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Trav5d-4Q5R1F6 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav5d-4Q5R1F6 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav5d-4Q5R1F6 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Trav5d-4Q5R1F6 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Trav5d-4Q5R1F6 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav5d-4Q5R1F6 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Trav5d-4Q5R1F6 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav5d-4Q5R1F6 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav5d-4Q5R1F6 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC10.76□□□□□ -0.69
Trav5d-4Q5R1F6 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Trav5d-4Q5R1F6 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Trav5d-4Q5R1F6 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav5d-4Q5R1F6 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC10.75□□□□□ -0.69
Trav5d-4Q5R1F6 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav5d-4Q5R1F6 Retreg1-206ENSMUST00000228306 1430 ntBASIC10.75□□□□□ -0.69
Trav5d-4Q5R1F6 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav5d-4Q5R1F6 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC10.75□□□□□ -0.69
Trav5d-4Q5R1F6 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav5d-4Q5R1F6 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav5d-4Q5R1F6 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav5d-4Q5R1F6 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Trav5d-4Q5R1F6 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC10.75□□□□□ -0.69
Trav5d-4Q5R1F6 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav5d-4Q5R1F6 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav5d-4Q5R1F6 Gm43823-201ENSMUST00000197391 1808 ntBASIC10.75□□□□□ -0.69
Trav5d-4Q5R1F6 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Trav5d-4Q5R1F6 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav5d-4Q5R1F6 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav5d-4Q5R1F6 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav5d-4Q5R1F6 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav5d-4Q5R1F6 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Trav5d-4Q5R1F6 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav5d-4Q5R1F6 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC10.75□□□□□ -0.69
Trav5d-4Q5R1F6 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Trav5d-4Q5R1F6 Gm5863-201ENSMUST00000121760 1008 ntBASIC10.75□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms