Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rc3h1Q4VGL6 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC14.5□□□□□ -0.09
Rc3h1Q4VGL6 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rc3h1Q4VGL6 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC14.5□□□□□ -0.09
Rc3h1Q4VGL6 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rc3h1Q4VGL6 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Rc3h1Q4VGL6 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rc3h1Q4VGL6 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC14.5□□□□□ -0.09
Rc3h1Q4VGL6 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rc3h1Q4VGL6 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rc3h1Q4VGL6 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rc3h1Q4VGL6 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Rc3h1Q4VGL6 Mir7070-201ENSMUST00000183657 86 ntBASIC14.5□□□□□ -0.09
Rc3h1Q4VGL6 Ighv5-7-201ENSMUST00000192302 244 ntBASIC14.5□□□□□ -0.09
Rc3h1Q4VGL6 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC14.5□□□□□ -0.09
Rc3h1Q4VGL6 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC14.5□□□□□ -0.09
Rc3h1Q4VGL6 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rc3h1Q4VGL6 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rc3h1Q4VGL6 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Rc3h1Q4VGL6 Gm10371-202ENSMUST00000228010 1081 ntBASIC14.5□□□□□ -0.09
Rc3h1Q4VGL6 AC123665.1-201ENSMUST00000228204 438 ntBASIC14.5□□□□□ -0.09
Rc3h1Q4VGL6 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rc3h1Q4VGL6 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rc3h1Q4VGL6 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rc3h1Q4VGL6 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Rc3h1Q4VGL6 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rc3h1Q4VGL6 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Rc3h1Q4VGL6 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rc3h1Q4VGL6 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rc3h1Q4VGL6 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rc3h1Q4VGL6 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Rc3h1Q4VGL6 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
Rc3h1Q4VGL6 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rc3h1Q4VGL6 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
Rc3h1Q4VGL6 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rc3h1Q4VGL6 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rc3h1Q4VGL6 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rc3h1Q4VGL6 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rc3h1Q4VGL6 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rc3h1Q4VGL6 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rc3h1Q4VGL6 Gm45342-201ENSMUST00000210903 1363 ntBASIC14.49□□□□□ -0.09
Rc3h1Q4VGL6 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rc3h1Q4VGL6 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rc3h1Q4VGL6 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rc3h1Q4VGL6 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rc3h1Q4VGL6 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Rc3h1Q4VGL6 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rc3h1Q4VGL6 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rc3h1Q4VGL6 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC14.49□□□□□ -0.09
Rc3h1Q4VGL6 Gm12015-201ENSMUST00000117065 843 ntBASIC14.49□□□□□ -0.09
Rc3h1Q4VGL6 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rc3h1Q4VGL6 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Rc3h1Q4VGL6 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rc3h1Q4VGL6 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC14.49□□□□□ -0.09
Rc3h1Q4VGL6 Gstp-ps-201ENSMUST00000195526 631 ntBASIC14.49□□□□□ -0.09
Rc3h1Q4VGL6 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC14.49□□□□□ -0.09
Rc3h1Q4VGL6 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rc3h1Q4VGL6 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rc3h1Q4VGL6 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC14.49□□□□□ -0.09
Rc3h1Q4VGL6 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Rc3h1Q4VGL6 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Rc3h1Q4VGL6 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rc3h1Q4VGL6 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rc3h1Q4VGL6 Gm5884-201ENSMUST00000036712 1479 ntBASIC14.49□□□□□ -0.09
Rc3h1Q4VGL6 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Rc3h1Q4VGL6 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rc3h1Q4VGL6 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Rc3h1Q4VGL6 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rc3h1Q4VGL6 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rc3h1Q4VGL6 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rc3h1Q4VGL6 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rc3h1Q4VGL6 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Rc3h1Q4VGL6 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rc3h1Q4VGL6 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rc3h1Q4VGL6 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rc3h1Q4VGL6 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rc3h1Q4VGL6 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rc3h1Q4VGL6 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rc3h1Q4VGL6 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rc3h1Q4VGL6 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Rc3h1Q4VGL6 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rc3h1Q4VGL6 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rc3h1Q4VGL6 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rc3h1Q4VGL6 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rc3h1Q4VGL6 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Rc3h1Q4VGL6 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC14.48□□□□□ -0.09
Rc3h1Q4VGL6 Gm11439-201ENSMUST00000118598 409 ntBASIC14.48□□□□□ -0.09
Rc3h1Q4VGL6 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC14.48□□□□□ -0.09
Rc3h1Q4VGL6 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Rc3h1Q4VGL6 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC14.48□□□□□ -0.09
Rc3h1Q4VGL6 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC14.48□□□□□ -0.09
Rc3h1Q4VGL6 Gm7003-201ENSMUST00000195089 312 ntBASIC14.48□□□□□ -0.09
Rc3h1Q4VGL6 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Rc3h1Q4VGL6 Gm44651-201ENSMUST00000207343 372 ntBASIC14.48□□□□□ -0.09
Rc3h1Q4VGL6 Gm5363-201ENSMUST00000211927 938 ntBASIC14.48□□□□□ -0.09
Rc3h1Q4VGL6 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC14.48□□□□□ -0.09
Rc3h1Q4VGL6 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC14.48□□□□□ -0.09
Rc3h1Q4VGL6 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rc3h1Q4VGL6 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC14.48□□□□□ -0.09
Rc3h1Q4VGL6 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms