Protein–RNA interactions for Protein: Q3V0M8

BC051142, Testis specific basic protein, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC051142Q3V0M8 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
BC051142Q3V0M8 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
BC051142Q3V0M8 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
BC051142Q3V0M8 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
BC051142Q3V0M8 Gm44260-201ENSMUST00000204946 2094 ntBASIC13.38□□□□□ -0.27
BC051142Q3V0M8 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
BC051142Q3V0M8 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
BC051142Q3V0M8 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
BC051142Q3V0M8 Gm43579-201ENSMUST00000202387 1307 ntBASIC13.38□□□□□ -0.27
BC051142Q3V0M8 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
BC051142Q3V0M8 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
BC051142Q3V0M8 Ptprm-203ENSMUST00000224091 3773 ntBASIC13.37□□□□□ -0.27
BC051142Q3V0M8 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
BC051142Q3V0M8 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
BC051142Q3V0M8 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
BC051142Q3V0M8 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
BC051142Q3V0M8 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
BC051142Q3V0M8 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC13.37□□□□□ -0.27
BC051142Q3V0M8 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
BC051142Q3V0M8 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
BC051142Q3V0M8 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
BC051142Q3V0M8 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
BC051142Q3V0M8 Gm24231-201ENSMUST00000104315 133 ntBASIC13.37□□□□□ -0.27
BC051142Q3V0M8 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
BC051142Q3V0M8 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
BC051142Q3V0M8 Gm11425-201ENSMUST00000119608 498 ntBASIC13.37□□□□□ -0.27
BC051142Q3V0M8 Gm14660-201ENSMUST00000119809 575 ntBASIC13.37□□□□□ -0.27
BC051142Q3V0M8 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
BC051142Q3V0M8 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
BC051142Q3V0M8 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
BC051142Q3V0M8 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC13.37□□□□□ -0.27
BC051142Q3V0M8 Gm8738-201ENSMUST00000172606 329 ntBASIC13.37□□□□□ -0.27
BC051142Q3V0M8 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC13.37□□□□□ -0.27
BC051142Q3V0M8 Gm44124-201ENSMUST00000204159 472 ntBASIC13.37□□□□□ -0.27
BC051142Q3V0M8 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC13.37□□□□□ -0.27
BC051142Q3V0M8 Gm9396-201ENSMUST00000076703 567 ntBASIC13.37□□□□□ -0.27
BC051142Q3V0M8 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
BC051142Q3V0M8 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
BC051142Q3V0M8 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
BC051142Q3V0M8 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
BC051142Q3V0M8 Dctn4-202ENSMUST00000223590 1530 ntBASIC13.37□□□□□ -0.27
BC051142Q3V0M8 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
BC051142Q3V0M8 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
BC051142Q3V0M8 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.37□□□□□ -0.27
BC051142Q3V0M8 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
BC051142Q3V0M8 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
BC051142Q3V0M8 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
BC051142Q3V0M8 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
BC051142Q3V0M8 Gm3287-205ENSMUST00000228893 1332 ntBASIC13.37□□□□□ -0.27
BC051142Q3V0M8 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC13.37□□□□□ -0.27
BC051142Q3V0M8 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
BC051142Q3V0M8 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
BC051142Q3V0M8 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
BC051142Q3V0M8 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
BC051142Q3V0M8 Gm18227-201ENSMUST00000211082 1468 ntBASIC13.36□□□□□ -0.27
BC051142Q3V0M8 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
BC051142Q3V0M8 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
BC051142Q3V0M8 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
BC051142Q3V0M8 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
BC051142Q3V0M8 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
BC051142Q3V0M8 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.36□□□□□ -0.27
BC051142Q3V0M8 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
BC051142Q3V0M8 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC13.36□□□□□ -0.27
BC051142Q3V0M8 Gm13226-201ENSMUST00000117838 404 ntBASIC13.36□□□□□ -0.27
BC051142Q3V0M8 Gm12384-201ENSMUST00000119228 919 ntBASIC13.36□□□□□ -0.27
BC051142Q3V0M8 Gm9431-201ENSMUST00000119765 1051 ntBASIC13.36□□□□□ -0.27
BC051142Q3V0M8 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
BC051142Q3V0M8 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
BC051142Q3V0M8 Gm8565-201ENSMUST00000183259 1014 ntBASIC13.36□□□□□ -0.27
BC051142Q3V0M8 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC13.36□□□□□ -0.27
BC051142Q3V0M8 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.36□□□□□ -0.27
BC051142Q3V0M8 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
BC051142Q3V0M8 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC13.36□□□□□ -0.27
BC051142Q3V0M8 AC140451.2-201ENSMUST00000228030 664 ntBASIC13.36□□□□□ -0.27
BC051142Q3V0M8 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
BC051142Q3V0M8 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
BC051142Q3V0M8 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
BC051142Q3V0M8 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
BC051142Q3V0M8 Gm22058-201ENSMUST00000083393 310 ntBASIC13.36□□□□□ -0.27
BC051142Q3V0M8 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
BC051142Q3V0M8 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
BC051142Q3V0M8 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
BC051142Q3V0M8 Daam2-202ENSMUST00000224595 1926 ntBASIC13.36□□□□□ -0.27
BC051142Q3V0M8 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
BC051142Q3V0M8 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
BC051142Q3V0M8 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
BC051142Q3V0M8 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
BC051142Q3V0M8 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
BC051142Q3V0M8 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
BC051142Q3V0M8 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC13.36□□□□□ -0.27
BC051142Q3V0M8 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
BC051142Q3V0M8 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
BC051142Q3V0M8 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC13.36□□□□□ -0.27
BC051142Q3V0M8 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
BC051142Q3V0M8 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
BC051142Q3V0M8 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
BC051142Q3V0M8 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
BC051142Q3V0M8 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
BC051142Q3V0M8 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
BC051142Q3V0M8 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms