Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxc4Q08624 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxc4Q08624 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxc4Q08624 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Hoxc4Q08624 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.03□□□□□ -0.48
Hoxc4Q08624 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxc4Q08624 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxc4Q08624 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.03□□□□□ -0.48
Hoxc4Q08624 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Hoxc4Q08624 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Hoxc4Q08624 Gm11989-201ENSMUST00000117240 672 ntBASIC12.03□□□□□ -0.48
Hoxc4Q08624 Gm11362-201ENSMUST00000118838 850 ntBASIC12.03□□□□□ -0.48
Hoxc4Q08624 Gm14208-201ENSMUST00000119645 678 ntBASIC12.03□□□□□ -0.48
Hoxc4Q08624 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.03□□□□□ -0.48
Hoxc4Q08624 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.03□□□□□ -0.48
Hoxc4Q08624 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxc4Q08624 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.03□□□□□ -0.48
Hoxc4Q08624 Gm18827-201ENSMUST00000188341 790 ntBASIC12.03□□□□□ -0.48
Hoxc4Q08624 Gm9445-201ENSMUST00000207454 1285 ntBASIC12.03□□□□□ -0.48
Hoxc4Q08624 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.03□□□□□ -0.48
Hoxc4Q08624 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.03□□□□□ -0.48
Hoxc4Q08624 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxc4Q08624 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Hoxc4Q08624 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Hoxc4Q08624 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxc4Q08624 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxc4Q08624 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxc4Q08624 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxc4Q08624 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxc4Q08624 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.03□□□□□ -0.48
Hoxc4Q08624 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxc4Q08624 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxc4Q08624 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxc4Q08624 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.03□□□□□ -0.48
Hoxc4Q08624 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.03□□□□□ -0.48
Hoxc4Q08624 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxc4Q08624 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.03□□□□□ -0.48
Hoxc4Q08624 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxc4Q08624 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxc4Q08624 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxc4Q08624 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxc4Q08624 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.03□□□□□ -0.48
Hoxc4Q08624 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Hoxc4Q08624 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hoxc4Q08624 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.02□□□□□ -0.48
Hoxc4Q08624 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Hoxc4Q08624 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hoxc4Q08624 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hoxc4Q08624 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hoxc4Q08624 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.02□□□□□ -0.48
Hoxc4Q08624 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.48
Hoxc4Q08624 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Hoxc4Q08624 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Hoxc4Q08624 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc4Q08624 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Hoxc4Q08624 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc4Q08624 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc4Q08624 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc4Q08624 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Hoxc4Q08624 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc4Q08624 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc4Q08624 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Hoxc4Q08624 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
Hoxc4Q08624 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc4Q08624 Gm24749-201ENSMUST00000157838 343 ntBASIC12.02□□□□□ -0.49
Hoxc4Q08624 Gm5616-201ENSMUST00000165252 384 ntBASIC12.02□□□□□ -0.49
Hoxc4Q08624 Gm8741-201ENSMUST00000174736 384 ntBASIC12.02□□□□□ -0.49
Hoxc4Q08624 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Hoxc4Q08624 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc4Q08624 Gm29615-201ENSMUST00000185371 697 ntBASIC12.02□□□□□ -0.49
Hoxc4Q08624 Gm28224-201ENSMUST00000186078 697 ntBASIC12.02□□□□□ -0.49
Hoxc4Q08624 Gm29001-201ENSMUST00000186177 697 ntBASIC12.02□□□□□ -0.49
Hoxc4Q08624 Gm28292-201ENSMUST00000186593 697 ntBASIC12.02□□□□□ -0.49
Hoxc4Q08624 Gm28101-201ENSMUST00000187608 697 ntBASIC12.02□□□□□ -0.49
Hoxc4Q08624 Gm29076-201ENSMUST00000187689 697 ntBASIC12.02□□□□□ -0.49
Hoxc4Q08624 Gm28302-201ENSMUST00000187931 697 ntBASIC12.02□□□□□ -0.49
Hoxc4Q08624 Gm28646-201ENSMUST00000188220 697 ntBASIC12.02□□□□□ -0.49
Hoxc4Q08624 Gm28205-201ENSMUST00000189177 697 ntBASIC12.02□□□□□ -0.49
Hoxc4Q08624 Gm29032-201ENSMUST00000189797 697 ntBASIC12.02□□□□□ -0.49
Hoxc4Q08624 Gm28695-201ENSMUST00000190300 697 ntBASIC12.02□□□□□ -0.49
Hoxc4Q08624 Gm37448-201ENSMUST00000192795 697 ntBASIC12.02□□□□□ -0.49
Hoxc4Q08624 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.02□□□□□ -0.49
Hoxc4Q08624 Gm18711-201ENSMUST00000199341 750 ntBASIC12.02□□□□□ -0.49
Hoxc4Q08624 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC12.02□□□□□ -0.49
Hoxc4Q08624 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc4Q08624 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc4Q08624 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc4Q08624 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc4Q08624 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc4Q08624 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc4Q08624 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Hoxc4Q08624 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc4Q08624 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc4Q08624 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Hoxc4Q08624 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.02□□□□□ -0.49
Hoxc4Q08624 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc4Q08624 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc4Q08624 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc4Q08624 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxc4Q08624 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms