Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Gm9083-201ENSMUST00000120423 819 ntBASIC14.21□□□□□ -0.13
GabpaQ00422 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
GabpaQ00422 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC14.21□□□□□ -0.13
GabpaQ00422 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC14.21□□□□□ -0.13
GabpaQ00422 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
GabpaQ00422 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC14.21□□□□□ -0.13
GabpaQ00422 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC14.21□□□□□ -0.13
GabpaQ00422 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC14.21□□□□□ -0.13
GabpaQ00422 AC159205.5-202ENSMUST00000224849 386 ntBASIC14.21□□□□□ -0.13
GabpaQ00422 CT025694.1-201ENSMUST00000226188 934 ntBASIC14.21□□□□□ -0.13
GabpaQ00422 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GabpaQ00422 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GabpaQ00422 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GabpaQ00422 Gm9996-201ENSMUST00000070359 913 ntBASIC14.21□□□□□ -0.13
GabpaQ00422 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GabpaQ00422 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
GabpaQ00422 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
GabpaQ00422 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GabpaQ00422 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.14
GabpaQ00422 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
GabpaQ00422 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
GabpaQ00422 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
GabpaQ00422 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
GabpaQ00422 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GabpaQ00422 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GabpaQ00422 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GabpaQ00422 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
GabpaQ00422 Gm13142-201ENSMUST00000117213 1453 ntBASIC14.2□□□□□ -0.14
GabpaQ00422 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GabpaQ00422 Gm6210-201ENSMUST00000204734 1942 ntBASIC14.2□□□□□ -0.14
GabpaQ00422 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC14.2□□□□□ -0.14
GabpaQ00422 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GabpaQ00422 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
GabpaQ00422 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GabpaQ00422 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GabpaQ00422 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GabpaQ00422 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GabpaQ00422 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
GabpaQ00422 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC14.2□□□□□ -0.14
GabpaQ00422 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GabpaQ00422 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
GabpaQ00422 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC14.2□□□□□ -0.14
GabpaQ00422 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GabpaQ00422 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GabpaQ00422 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GabpaQ00422 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GabpaQ00422 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
GabpaQ00422 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GabpaQ00422 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GabpaQ00422 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GabpaQ00422 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GabpaQ00422 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GabpaQ00422 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
GabpaQ00422 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
GabpaQ00422 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GabpaQ00422 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
GabpaQ00422 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GabpaQ00422 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GabpaQ00422 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC14.19□□□□□ -0.14
GabpaQ00422 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
GabpaQ00422 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GabpaQ00422 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC14.19□□□□□ -0.14
GabpaQ00422 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GabpaQ00422 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GabpaQ00422 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GabpaQ00422 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GabpaQ00422 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GabpaQ00422 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
GabpaQ00422 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GabpaQ00422 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC14.19□□□□□ -0.14
GabpaQ00422 Gm5616-201ENSMUST00000165252 384 ntBASIC14.19□□□□□ -0.14
GabpaQ00422 Gm8741-201ENSMUST00000174736 384 ntBASIC14.19□□□□□ -0.14
GabpaQ00422 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC14.19□□□□□ -0.14
GabpaQ00422 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC14.19□□□□□ -0.14
GabpaQ00422 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC14.19□□□□□ -0.14
GabpaQ00422 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GabpaQ00422 AC154252.2-201ENSMUST00000223593 767 ntBASIC14.19□□□□□ -0.14
GabpaQ00422 AC093022.5-201ENSMUST00000226841 1079 ntBASIC14.19□□□□□ -0.14
GabpaQ00422 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GabpaQ00422 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GabpaQ00422 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GabpaQ00422 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
GabpaQ00422 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GabpaQ00422 Gm45342-201ENSMUST00000210903 1363 ntBASIC14.19□□□□□ -0.14
GabpaQ00422 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GabpaQ00422 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GabpaQ00422 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GabpaQ00422 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GabpaQ00422 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GabpaQ00422 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC14.19□□□□□ -0.14
GabpaQ00422 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GabpaQ00422 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
GabpaQ00422 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GabpaQ00422 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
GabpaQ00422 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GabpaQ00422 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
GabpaQ00422 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
GabpaQ00422 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GabpaQ00422 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GabpaQ00422 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms