Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb1P70662 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Ldb1P70662 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb1P70662 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb1P70662 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.47□□□□□ -0.41
Ldb1P70662 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb1P70662 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb1P70662 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Ldb1P70662 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb1P70662 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb1P70662 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb1P70662 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Ldb1P70662 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb1P70662 Gm23931-201ENSMUST00000103842 109 ntBASIC12.47□□□□□ -0.41
Ldb1P70662 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb1P70662 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.47□□□□□ -0.41
Ldb1P70662 Gm11964-201ENSMUST00000120982 444 ntBASIC12.47□□□□□ -0.41
Ldb1P70662 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.47□□□□□ -0.41
Ldb1P70662 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.47□□□□□ -0.41
Ldb1P70662 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.47□□□□□ -0.41
Ldb1P70662 Gm43433-201ENSMUST00000196573 481 ntBASIC12.47□□□□□ -0.41
Ldb1P70662 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.47□□□□□ -0.41
Ldb1P70662 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb1P70662 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb1P70662 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.47□□□□□ -0.41
Ldb1P70662 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.47□□□□□ -0.41
Ldb1P70662 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.47□□□□□ -0.41
Ldb1P70662 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb1P70662 Gm22058-201ENSMUST00000083393 310 ntBASIC12.47□□□□□ -0.41
Ldb1P70662 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb1P70662 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb1P70662 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb1P70662 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb1P70662 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb1P70662 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb1P70662 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb1P70662 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Ldb1P70662 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.47□□□□□ -0.41
Ldb1P70662 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.47□□□□□ -0.41
Ldb1P70662 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb1P70662 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.47□□□□□ -0.41
Ldb1P70662 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb1P70662 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.47□□□□□ -0.41
Ldb1P70662 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ldb1P70662 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ldb1P70662 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ldb1P70662 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ldb1P70662 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ldb1P70662 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.46□□□□□ -0.41
Ldb1P70662 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ldb1P70662 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ldb1P70662 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ldb1P70662 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.41
Ldb1P70662 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
Ldb1P70662 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ldb1P70662 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ldb1P70662 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.46□□□□□ -0.41
Ldb1P70662 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ldb1P70662 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ldb1P70662 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ldb1P70662 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ldb1P70662 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Ldb1P70662 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ldb1P70662 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Ldb1P70662 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.46□□□□□ -0.41
Ldb1P70662 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.46□□□□□ -0.41
Ldb1P70662 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Ldb1P70662 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.46□□□□□ -0.41
Ldb1P70662 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.46□□□□□ -0.41
Ldb1P70662 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.46□□□□□ -0.41
Ldb1P70662 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.46□□□□□ -0.41
Ldb1P70662 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.46□□□□□ -0.41
Ldb1P70662 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ldb1P70662 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ldb1P70662 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ldb1P70662 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Ldb1P70662 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Ldb1P70662 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.42
Ldb1P70662 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ldb1P70662 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ldb1P70662 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Ldb1P70662 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ldb1P70662 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.46□□□□□ -0.42
Ldb1P70662 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ldb1P70662 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ldb1P70662 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ldb1P70662 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ldb1P70662 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ldb1P70662 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ldb1P70662 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ldb1P70662 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ldb1P70662 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.45□□□□□ -0.42
Ldb1P70662 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ldb1P70662 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ldb1P70662 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ldb1P70662 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ldb1P70662 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ldb1P70662 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ldb1P70662 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ldb1P70662 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms