Protein–RNA interactions for Protein: P70278

Stra8, Stimulated by retinoic acid gene 8 protein, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stra8P70278 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Stra8P70278 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Stra8P70278 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Stra8P70278 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Stra8P70278 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Stra8P70278 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Stra8P70278 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Stra8P70278 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Stra8P70278 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC17.32■□□□□ 0.36
Stra8P70278 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Stra8P70278 Gm37105-201ENSMUST00000192251 2085 ntBASIC17.32■□□□□ 0.36
Stra8P70278 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Stra8P70278 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Stra8P70278 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Stra8P70278 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Stra8P70278 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Stra8P70278 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC17.31■□□□□ 0.36
Stra8P70278 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC17.31■□□□□ 0.36
Stra8P70278 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Stra8P70278 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Stra8P70278 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Stra8P70278 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Stra8P70278 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Stra8P70278 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC17.31■□□□□ 0.36
Stra8P70278 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Stra8P70278 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Stra8P70278 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Stra8P70278 Gm44064-201ENSMUST00000204964 1087 ntBASIC17.31■□□□□ 0.36
Stra8P70278 AC122305.4-201ENSMUST00000216159 1206 ntBASIC17.31■□□□□ 0.36
Stra8P70278 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC17.31■□□□□ 0.36
Stra8P70278 Gm17794-201ENSMUST00000220252 955 ntBASIC17.31■□□□□ 0.36
Stra8P70278 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Stra8P70278 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Stra8P70278 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Stra8P70278 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Stra8P70278 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Stra8P70278 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC17.31■□□□□ 0.36
Stra8P70278 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Stra8P70278 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Stra8P70278 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC17.3■□□□□ 0.36
Stra8P70278 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC17.3■□□□□ 0.36
Stra8P70278 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Stra8P70278 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Stra8P70278 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC17.3■□□□□ 0.36
Stra8P70278 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Stra8P70278 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Stra8P70278 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Stra8P70278 Gm16202-201ENSMUST00000117532 544 ntBASIC17.3■□□□□ 0.36
Stra8P70278 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Stra8P70278 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC17.3■□□□□ 0.36
Stra8P70278 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC17.3■□□□□ 0.36
Stra8P70278 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Stra8P70278 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Stra8P70278 Gm9061-201ENSMUST00000182707 1006 ntBASIC17.3■□□□□ 0.36
Stra8P70278 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC17.3■□□□□ 0.36
Stra8P70278 Gm8598-201ENSMUST00000221184 836 ntBASIC17.3■□□□□ 0.36
Stra8P70278 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Stra8P70278 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Stra8P70278 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Stra8P70278 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Stra8P70278 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Stra8P70278 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Stra8P70278 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Stra8P70278 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
Stra8P70278 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
Stra8P70278 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Stra8P70278 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
Stra8P70278 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Stra8P70278 Gm7224-201ENSMUST00000121359 2066 ntBASIC17.3■□□□□ 0.36
Stra8P70278 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Stra8P70278 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Stra8P70278 AC101945.2-201ENSMUST00000227886 1377 ntBASIC17.29■□□□□ 0.36
Stra8P70278 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Stra8P70278 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC17.29■□□□□ 0.36
Stra8P70278 Rubie-203ENSMUST00000227803 2430 ntBASIC17.29■□□□□ 0.36
Stra8P70278 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Stra8P70278 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Stra8P70278 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Stra8P70278 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Stra8P70278 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Stra8P70278 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Stra8P70278 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Stra8P70278 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Stra8P70278 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Stra8P70278 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Stra8P70278 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC17.29■□□□□ 0.36
Stra8P70278 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Stra8P70278 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Stra8P70278 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Stra8P70278 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC17.29■□□□□ 0.36
Stra8P70278 Gm27486-201ENSMUST00000184923 80 ntBASIC17.29■□□□□ 0.36
Stra8P70278 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Stra8P70278 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Stra8P70278 Gm44799-201ENSMUST00000207639 1202 ntBASIC17.29■□□□□ 0.36
Stra8P70278 Gm6458-201ENSMUST00000211573 635 ntBASIC17.29■□□□□ 0.36
Stra8P70278 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Stra8P70278 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Stra8P70278 Gm16372-201ENSMUST00000073088 450 ntBASIC17.29■□□□□ 0.36
Stra8P70278 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Stra8P70278 Gm15544-201ENSMUST00000118776 1531 ntBASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms