Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm18263-201ENSMUST00000220846 1928 ntBASIC13.84□□□□□ -0.19
Hmgb1P63158 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Hmgb1P63158 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Hmgb1P63158 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Hmgb1P63158 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hmgb1P63158 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hmgb1P63158 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hmgb1P63158 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hmgb1P63158 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Hmgb1P63158 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Hmgb1P63158 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hmgb1P63158 Gm5053-201ENSMUST00000208361 1678 ntBASIC13.83□□□□□ -0.2
Hmgb1P63158 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Hmgb1P63158 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Hmgb1P63158 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hmgb1P63158 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hmgb1P63158 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hmgb1P63158 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC13.83□□□□□ -0.2
Hmgb1P63158 Gm12138-201ENSMUST00000122180 951 ntBASIC13.83□□□□□ -0.2
Hmgb1P63158 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC13.83□□□□□ -0.2
Hmgb1P63158 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC13.83□□□□□ -0.2
Hmgb1P63158 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Hmgb1P63158 Gm27847-201ENSMUST00000183711 107 ntBASIC13.83□□□□□ -0.2
Hmgb1P63158 Gm27375-201ENSMUST00000183799 107 ntBASIC13.83□□□□□ -0.2
Hmgb1P63158 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Hmgb1P63158 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hmgb1P63158 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hmgb1P63158 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hmgb1P63158 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hmgb1P63158 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hmgb1P63158 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC13.83□□□□□ -0.2
Hmgb1P63158 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Hmgb1P63158 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hmgb1P63158 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Hmgb1P63158 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.83□□□□□ -0.2
Hmgb1P63158 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hmgb1P63158 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hmgb1P63158 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hmgb1P63158 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hmgb1P63158 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Hmgb1P63158 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Hmgb1P63158 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Hmgb1P63158 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hmgb1P63158 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hmgb1P63158 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hmgb1P63158 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hmgb1P63158 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hmgb1P63158 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hmgb1P63158 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hmgb1P63158 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hmgb1P63158 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC13.82□□□□□ -0.2
Hmgb1P63158 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC13.82□□□□□ -0.2
Hmgb1P63158 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hmgb1P63158 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hmgb1P63158 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC13.82□□□□□ -0.2
Hmgb1P63158 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC13.82□□□□□ -0.2
Hmgb1P63158 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hmgb1P63158 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hmgb1P63158 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hmgb1P63158 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hmgb1P63158 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hmgb1P63158 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hmgb1P63158 Gm36970-201ENSMUST00000193688 1859 ntBASIC13.82□□□□□ -0.2
Hmgb1P63158 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hmgb1P63158 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Hmgb1P63158 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hmgb1P63158 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hmgb1P63158 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC13.82□□□□□ -0.2
Hmgb1P63158 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hmgb1P63158 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hmgb1P63158 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hmgb1P63158 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hmgb1P63158 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hmgb1P63158 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hmgb1P63158 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hmgb1P63158 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hmgb1P63158 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hmgb1P63158 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.81□□□□□ -0.2
Hmgb1P63158 Gm32025-201ENSMUST00000217960 307 ntBASIC13.81□□□□□ -0.2
Hmgb1P63158 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hmgb1P63158 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hmgb1P63158 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Hmgb1P63158 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hmgb1P63158 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hmgb1P63158 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hmgb1P63158 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hmgb1P63158 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hmgb1P63158 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hmgb1P63158 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hmgb1P63158 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hmgb1P63158 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hmgb1P63158 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.81□□□□□ -0.2
Hmgb1P63158 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hmgb1P63158 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hmgb1P63158 Gm45743-201ENSMUST00000212701 2795 ntBASIC13.8□□□□□ -0.2
Hmgb1P63158 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hmgb1P63158 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hmgb1P63158 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hmgb1P63158 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Hmgb1P63158 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms