Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.73□□□□□ -0.37
ThraP63058 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
ThraP63058 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ThraP63058 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ThraP63058 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
ThraP63058 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ThraP63058 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
ThraP63058 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
ThraP63058 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
ThraP63058 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ThraP63058 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ThraP63058 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.72□□□□□ -0.37
ThraP63058 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.72□□□□□ -0.37
ThraP63058 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ThraP63058 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ThraP63058 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
ThraP63058 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
ThraP63058 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ThraP63058 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ThraP63058 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
ThraP63058 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.72□□□□□ -0.37
ThraP63058 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ThraP63058 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ThraP63058 Gm11591-201ENSMUST00000120063 702 ntBASIC12.72□□□□□ -0.37
ThraP63058 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.72□□□□□ -0.37
ThraP63058 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.72□□□□□ -0.37
ThraP63058 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
ThraP63058 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ThraP63058 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.72□□□□□ -0.37
ThraP63058 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.72□□□□□ -0.37
ThraP63058 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.72□□□□□ -0.37
ThraP63058 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ThraP63058 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.72□□□□□ -0.37
ThraP63058 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.72□□□□□ -0.37
ThraP63058 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.72□□□□□ -0.37
ThraP63058 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.72□□□□□ -0.37
ThraP63058 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ThraP63058 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ThraP63058 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ThraP63058 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ThraP63058 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ThraP63058 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ThraP63058 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ThraP63058 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ThraP63058 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ThraP63058 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ThraP63058 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ThraP63058 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.71□□□□□ -0.37
ThraP63058 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ThraP63058 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
ThraP63058 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.71□□□□□ -0.37
ThraP63058 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ThraP63058 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ThraP63058 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ThraP63058 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.71□□□□□ -0.37
ThraP63058 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.71□□□□□ -0.37
ThraP63058 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
ThraP63058 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ThraP63058 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ThraP63058 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ThraP63058 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.71□□□□□ -0.37
ThraP63058 Gm38241-201ENSMUST00000192641 898 ntBASIC12.71□□□□□ -0.37
ThraP63058 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.71□□□□□ -0.37
ThraP63058 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ThraP63058 Gm38341-201ENSMUST00000195357 515 ntBASIC12.71□□□□□ -0.37
ThraP63058 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.71□□□□□ -0.37
ThraP63058 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.71□□□□□ -0.37
ThraP63058 Gm6334-201ENSMUST00000207083 228 ntBASIC12.71□□□□□ -0.37
ThraP63058 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
ThraP63058 Gm24526-201ENSMUST00000082921 158 ntBASIC12.71□□□□□ -0.37
ThraP63058 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ThraP63058 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ThraP63058 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ThraP63058 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
ThraP63058 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ThraP63058 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
ThraP63058 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
ThraP63058 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
ThraP63058 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
ThraP63058 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.71□□□□□ -0.38
ThraP63058 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
ThraP63058 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.71□□□□□ -0.38
ThraP63058 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.71□□□□□ -0.38
ThraP63058 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
ThraP63058 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
ThraP63058 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
ThraP63058 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
ThraP63058 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ThraP63058 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ThraP63058 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
ThraP63058 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ThraP63058 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ThraP63058 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.7□□□□□ -0.38
ThraP63058 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.7□□□□□ -0.38
ThraP63058 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ThraP63058 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ThraP63058 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ThraP63058 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ThraP63058 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.7□□□□□ -0.38
ThraP63058 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms