Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC10.12□□□□□ -0.79
Sssca1P56873 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC10.12□□□□□ -0.79
Sssca1P56873 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Sssca1P56873 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sssca1P56873 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sssca1P56873 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC10.12□□□□□ -0.79
Sssca1P56873 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sssca1P56873 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sssca1P56873 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Sssca1P56873 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC10.12□□□□□ -0.79
Sssca1P56873 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sssca1P56873 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Sssca1P56873 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Sssca1P56873 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sssca1P56873 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Sssca1P56873 Gm5276-201ENSMUST00000196683 1047 ntBASIC10.12□□□□□ -0.79
Sssca1P56873 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC10.12□□□□□ -0.79
Sssca1P56873 Gm43416-201ENSMUST00000201916 1015 ntBASIC10.12□□□□□ -0.79
Sssca1P56873 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC10.12□□□□□ -0.79
Sssca1P56873 Wdyhv1-203ENSMUST00000226889 394 ntBASIC10.12□□□□□ -0.79
Sssca1P56873 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC10.12□□□□□ -0.79
Sssca1P56873 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Sssca1P56873 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sssca1P56873 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sssca1P56873 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC10.12□□□□□ -0.79
Sssca1P56873 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Sssca1P56873 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Sssca1P56873 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Sssca1P56873 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sssca1P56873 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Sssca1P56873 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sssca1P56873 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Sssca1P56873 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sssca1P56873 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sssca1P56873 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sssca1P56873 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sssca1P56873 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sssca1P56873 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Sssca1P56873 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Sssca1P56873 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Sssca1P56873 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC10.11□□□□□ -0.79
Sssca1P56873 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Sssca1P56873 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Sssca1P56873 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
Sssca1P56873 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC10.11□□□□□ -0.79
Sssca1P56873 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Sssca1P56873 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Sssca1P56873 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Sssca1P56873 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Sssca1P56873 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Sssca1P56873 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Sssca1P56873 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Sssca1P56873 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Sssca1P56873 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
Sssca1P56873 Gm27390-201ENSMUST00000184516 176 ntBASIC10.11□□□□□ -0.79
Sssca1P56873 Mir7023-201ENSMUST00000185093 64 ntBASIC10.11□□□□□ -0.79
Sssca1P56873 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC10.11□□□□□ -0.79
Sssca1P56873 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC10.11□□□□□ -0.79
Sssca1P56873 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Sssca1P56873 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC10.11□□□□□ -0.79
Sssca1P56873 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC10.11□□□□□ -0.79
Sssca1P56873 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC10.11□□□□□ -0.79
Sssca1P56873 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC10.11□□□□□ -0.79
Sssca1P56873 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Sssca1P56873 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Sssca1P56873 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Sssca1P56873 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Sssca1P56873 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Sssca1P56873 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC10.11□□□□□ -0.79
Sssca1P56873 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Sssca1P56873 Gm10728-201ENSMUST00000194292 1829 ntBASIC10.11□□□□□ -0.79
Sssca1P56873 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Sssca1P56873 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Sssca1P56873 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Sssca1P56873 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Sssca1P56873 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Sssca1P56873 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Sssca1P56873 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Sssca1P56873 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Sssca1P56873 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Sssca1P56873 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Sssca1P56873 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Sssca1P56873 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Sssca1P56873 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC10.1□□□□□ -0.79
Sssca1P56873 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Sssca1P56873 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Sssca1P56873 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Sssca1P56873 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Sssca1P56873 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Sssca1P56873 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC10.1□□□□□ -0.79
Sssca1P56873 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Sssca1P56873 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Sssca1P56873 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Sssca1P56873 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Sssca1P56873 Gm42943-201ENSMUST00000199676 3242 ntBASIC10.1□□□□□ -0.79
Sssca1P56873 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Sssca1P56873 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC10.1□□□□□ -0.79
Sssca1P56873 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Sssca1P56873 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Sssca1P56873 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms