Protein–RNA interactions for Protein: P54285

Cacnb3, Voltage-dependent L-type calcium channel subunit beta-3, mousemouse

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb3P54285 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cacnb3P54285 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cacnb3P54285 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cacnb3P54285 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cacnb3P54285 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.59□□□□□ -0.07
Cacnb3P54285 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cacnb3P54285 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cacnb3P54285 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cacnb3P54285 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cacnb3P54285 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cacnb3P54285 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Cacnb3P54285 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Cacnb3P54285 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Cacnb3P54285 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC14.58□□□□□ -0.08
Cacnb3P54285 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Cacnb3P54285 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cacnb3P54285 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Cacnb3P54285 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cacnb3P54285 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cacnb3P54285 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC14.58□□□□□ -0.08
Cacnb3P54285 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC14.58□□□□□ -0.08
Cacnb3P54285 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cacnb3P54285 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC14.58□□□□□ -0.08
Cacnb3P54285 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC14.58□□□□□ -0.08
Cacnb3P54285 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC14.58□□□□□ -0.08
Cacnb3P54285 AC159819.2-201ENSMUST00000216151 342 ntBASIC14.58□□□□□ -0.08
Cacnb3P54285 Ntng1-201ENSMUST00000051253 327 ntBASIC14.58□□□□□ -0.08
Cacnb3P54285 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cacnb3P54285 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cacnb3P54285 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cacnb3P54285 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cacnb3P54285 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cacnb3P54285 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cacnb3P54285 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cacnb3P54285 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cacnb3P54285 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cacnb3P54285 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Cacnb3P54285 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cacnb3P54285 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cacnb3P54285 Retreg1-206ENSMUST00000228306 1430 ntBASIC14.58□□□□□ -0.08
Cacnb3P54285 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cacnb3P54285 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Cacnb3P54285 Gm43858-201ENSMUST00000199418 1778 ntBASIC14.57□□□□□ -0.08
Cacnb3P54285 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cacnb3P54285 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cacnb3P54285 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Cacnb3P54285 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cacnb3P54285 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cacnb3P54285 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cacnb3P54285 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cacnb3P54285 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cacnb3P54285 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cacnb3P54285 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Cacnb3P54285 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cacnb3P54285 Gm24934-201ENSMUST00000103764 111 ntBASIC14.57□□□□□ -0.08
Cacnb3P54285 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cacnb3P54285 Gm14058-201ENSMUST00000116082 735 ntBASIC14.57□□□□□ -0.08
Cacnb3P54285 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC14.57□□□□□ -0.08
Cacnb3P54285 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cacnb3P54285 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cacnb3P54285 Gm27530-201ENSMUST00000184096 98 ntBASIC14.57□□□□□ -0.08
Cacnb3P54285 Gm3508-201ENSMUST00000186012 792 ntBASIC14.57□□□□□ -0.08
Cacnb3P54285 Gm18393-201ENSMUST00000208349 1131 ntBASIC14.57□□□□□ -0.08
Cacnb3P54285 AC154252.2-201ENSMUST00000223593 767 ntBASIC14.57□□□□□ -0.08
Cacnb3P54285 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cacnb3P54285 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cacnb3P54285 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC14.57□□□□□ -0.08
Cacnb3P54285 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cacnb3P54285 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cacnb3P54285 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cacnb3P54285 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cacnb3P54285 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC14.57□□□□□ -0.08
Cacnb3P54285 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.57□□□□□ -0.08
Cacnb3P54285 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cacnb3P54285 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cacnb3P54285 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Cacnb3P54285 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC14.57□□□□□ -0.08
Cacnb3P54285 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Cacnb3P54285 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cacnb3P54285 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC14.57□□□□□ -0.08
Cacnb3P54285 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Cacnb3P54285 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Cacnb3P54285 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cacnb3P54285 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cacnb3P54285 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cacnb3P54285 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Cacnb3P54285 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.56□□□□□ -0.08
Cacnb3P54285 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cacnb3P54285 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC14.56□□□□□ -0.08
Cacnb3P54285 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cacnb3P54285 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cacnb3P54285 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cacnb3P54285 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Cacnb3P54285 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC14.56□□□□□ -0.08
Cacnb3P54285 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC14.56□□□□□ -0.08
Cacnb3P54285 Gm10051-201ENSMUST00000145209 414 ntBASIC14.56□□□□□ -0.08
Cacnb3P54285 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Cacnb3P54285 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC14.56□□□□□ -0.08
Cacnb3P54285 Gm10109-202ENSMUST00000206890 1211 ntBASIC14.56□□□□□ -0.08
Cacnb3P54285 Gm7207-201ENSMUST00000211575 1067 ntBASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms