Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Xcl1P47993 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC8.06□□□□□ -1.12
Xcl1P47993 Sema4g-203ENSMUST00000179305 4290 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Xcl1P47993 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
Xcl1P47993 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Xcl1P47993 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Xcl1P47993 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Xcl1P47993 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC8.06□□□□□ -1.12
Xcl1P47993 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Xcl1P47993 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
Xcl1P47993 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC8.05□□□□□ -1.12
Xcl1P47993 Cacna1d-204ENSMUST00000223803 6435 ntAPPRIS ALT2 BASIC8.05□□□□□ -1.12
Xcl1P47993 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Xcl1P47993 Gm16478-201ENSMUST00000208113 5084 ntBASIC8.05□□□□□ -1.12
Xcl1P47993 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC8.05□□□□□ -1.12
Xcl1P47993 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Xcl1P47993 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Xcl1P47993 Rreb1-207ENSMUST00000128570 8436 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Xcl1P47993 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
Xcl1P47993 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
Xcl1P47993 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Xcl1P47993 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Xcl1P47993 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Xcl1P47993 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Xcl1P47993 Plec-215ENSMUST00000169108 14853 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Xcl1P47993 Zfp275-201ENSMUST00000033731 6376 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
Xcl1P47993 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Xcl1P47993 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Xcl1P47993 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Xcl1P47993 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Xcl1P47993 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Xcl1P47993 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Xcl1P47993 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Xcl1P47993 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Xcl1P47993 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC8.05□□□□□ -1.12
Xcl1P47993 Gm27920-201ENSMUST00000183953 96 ntBASIC8.05□□□□□ -1.12
Xcl1P47993 Gm17808-201ENSMUST00000200859 894 ntBASIC8.05□□□□□ -1.12
Xcl1P47993 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC8.05□□□□□ -1.12
Xcl1P47993 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Xcl1P47993 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC8.05□□□□□ -1.12
Xcl1P47993 AC156016.3-201ENSMUST00000228623 344 ntBASIC8.05□□□□□ -1.12
Xcl1P47993 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Xcl1P47993 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Xcl1P47993 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Xcl1P47993 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Xcl1P47993 Myo9a-206ENSMUST00000136740 12252 ntAPPRIS P2 TSL 5 BASIC8.05□□□□□ -1.12
Xcl1P47993 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Xcl1P47993 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Xcl1P47993 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Xcl1P47993 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Xcl1P47993 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Xcl1P47993 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Xcl1P47993 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Xcl1P47993 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC8.05□□□□□ -1.12
Xcl1P47993 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC8.05□□□□□ -1.12
Xcl1P47993 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Xcl1P47993 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Xcl1P47993 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Xcl1P47993 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC8.05□□□□□ -1.12
Xcl1P47993 Kif14-201ENSMUST00000047817 8770 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Xcl1P47993 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
Xcl1P47993 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Xcl1P47993 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Xcl1P47993 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
Xcl1P47993 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Xcl1P47993 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Xcl1P47993 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC8.05□□□□□ -1.12
Xcl1P47993 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Xcl1P47993 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Xcl1P47993 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Xcl1P47993 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Xcl1P47993 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Xcl1P47993 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Xcl1P47993 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Xcl1P47993 Rhobtb1-201ENSMUST00000020101 4352 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Xcl1P47993 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC8.04□□□□□ -1.12
Xcl1P47993 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Xcl1P47993 Ldb3-205ENSMUST00000090040 4981 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Xcl1P47993 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC8.04□□□□□ -1.12
Xcl1P47993 Ank1-215ENSMUST00000173248 7100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Xcl1P47993 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Xcl1P47993 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Xcl1P47993 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Xcl1P47993 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Xcl1P47993 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC8.04□□□□□ -1.12
Xcl1P47993 Gm44094-201ENSMUST00000204703 2030 ntBASIC8.04□□□□□ -1.12
Xcl1P47993 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Xcl1P47993 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC8.04□□□□□ -1.12
Xcl1P47993 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC8.04□□□□□ -1.12
Xcl1P47993 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC8.04□□□□□ -1.12
Xcl1P47993 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Xcl1P47993 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Xcl1P47993 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Xcl1P47993 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Xcl1P47993 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Xcl1P47993 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Xcl1P47993 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Xcl1P47993 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Xcl1P47993 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Xcl1P47993 1810041L15Rik-201ENSMUST00000080751 5917 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms