Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hist1h1aP43275 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Hist1h1aP43275 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Hist1h1aP43275 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Hist1h1aP43275 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hist1h1aP43275 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC10.36□□□□□ -0.75
Hist1h1aP43275 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hist1h1aP43275 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hist1h1aP43275 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC10.36□□□□□ -0.75
Hist1h1aP43275 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hist1h1aP43275 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hist1h1aP43275 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hist1h1aP43275 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Hist1h1aP43275 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hist1h1aP43275 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hist1h1aP43275 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
Hist1h1aP43275 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hist1h1aP43275 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hist1h1aP43275 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hist1h1aP43275 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC10.35□□□□□ -0.75
Hist1h1aP43275 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hist1h1aP43275 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Hist1h1aP43275 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Hist1h1aP43275 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hist1h1aP43275 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hist1h1aP43275 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hist1h1aP43275 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Hist1h1aP43275 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Hist1h1aP43275 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hist1h1aP43275 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC10.35□□□□□ -0.75
Hist1h1aP43275 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Hist1h1aP43275 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Hist1h1aP43275 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC10.35□□□□□ -0.75
Hist1h1aP43275 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hist1h1aP43275 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hist1h1aP43275 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hist1h1aP43275 Gm12859-201ENSMUST00000117834 427 ntBASIC10.35□□□□□ -0.75
Hist1h1aP43275 Gm12539-201ENSMUST00000121549 1098 ntBASIC10.35□□□□□ -0.75
Hist1h1aP43275 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC10.35□□□□□ -0.75
Hist1h1aP43275 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC10.35□□□□□ -0.75
Hist1h1aP43275 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hist1h1aP43275 Mir6977-201ENSMUST00000184960 64 ntBASIC10.35□□□□□ -0.75
Hist1h1aP43275 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Hist1h1aP43275 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC10.35□□□□□ -0.75
Hist1h1aP43275 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Hist1h1aP43275 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC10.35□□□□□ -0.75
Hist1h1aP43275 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC10.35□□□□□ -0.75
Hist1h1aP43275 AC238811.3-201ENSMUST00000225422 709 ntBASIC10.35□□□□□ -0.75
Hist1h1aP43275 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hist1h1aP43275 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Hist1h1aP43275 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hist1h1aP43275 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hist1h1aP43275 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hist1h1aP43275 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Hist1h1aP43275 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Hist1h1aP43275 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hist1h1aP43275 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hist1h1aP43275 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Hist1h1aP43275 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Hist1h1aP43275 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC10.35□□□□□ -0.75
Hist1h1aP43275 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hist1h1aP43275 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hist1h1aP43275 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hist1h1aP43275 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC10.35□□□□□ -0.75
Hist1h1aP43275 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hist1h1aP43275 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hist1h1aP43275 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hist1h1aP43275 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hist1h1aP43275 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hist1h1aP43275 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hist1h1aP43275 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC10.35□□□□□ -0.75
Hist1h1aP43275 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Hist1h1aP43275 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hist1h1aP43275 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hist1h1aP43275 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hist1h1aP43275 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC10.34□□□□□ -0.75
Hist1h1aP43275 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hist1h1aP43275 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hist1h1aP43275 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hist1h1aP43275 Gm43365-201ENSMUST00000196522 2106 ntBASIC10.34□□□□□ -0.75
Hist1h1aP43275 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hist1h1aP43275 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Hist1h1aP43275 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hist1h1aP43275 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hist1h1aP43275 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hist1h1aP43275 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hist1h1aP43275 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Hist1h1aP43275 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Hist1h1aP43275 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Hist1h1aP43275 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC10.34□□□□□ -0.75
Hist1h1aP43275 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hist1h1aP43275 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Hist1h1aP43275 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hist1h1aP43275 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Hist1h1aP43275 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hist1h1aP43275 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC10.34□□□□□ -0.75
Hist1h1aP43275 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Hist1h1aP43275 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hist1h1aP43275 Gm42929-201ENSMUST00000198374 1286 ntBASIC10.34□□□□□ -0.75
Hist1h1aP43275 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 96.5 ms