Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Vcam1P29533 Gm28323-201ENSMUST00000186817 2499 ntBASIC14.35□□□□□ -0.11
Vcam1P29533 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Vcam1P29533 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vcam1P29533 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Vcam1P29533 AC159308.2-201ENSMUST00000213592 2325 ntBASIC14.35□□□□□ -0.11
Vcam1P29533 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Vcam1P29533 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vcam1P29533 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vcam1P29533 Gm7722-201ENSMUST00000120646 741 ntBASIC14.35□□□□□ -0.11
Vcam1P29533 Gm12201-201ENSMUST00000120657 1234 ntBASIC14.35□□□□□ -0.11
Vcam1P29533 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vcam1P29533 Rprl1-201ENSMUST00000158050 327 ntBASIC14.35□□□□□ -0.11
Vcam1P29533 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vcam1P29533 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC14.35□□□□□ -0.11
Vcam1P29533 Gm18038-201ENSMUST00000197900 485 ntBASIC14.35□□□□□ -0.11
Vcam1P29533 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC14.35□□□□□ -0.11
Vcam1P29533 Spcs1-203ENSMUST00000226374 592 ntBASIC14.35□□□□□ -0.11
Vcam1P29533 Gm14267-206ENSMUST00000226870 1209 ntBASIC14.35□□□□□ -0.11
Vcam1P29533 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vcam1P29533 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Vcam1P29533 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Vcam1P29533 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vcam1P29533 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vcam1P29533 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vcam1P29533 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC14.35□□□□□ -0.11
Vcam1P29533 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vcam1P29533 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vcam1P29533 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Vcam1P29533 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC14.35□□□□□ -0.11
Vcam1P29533 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vcam1P29533 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vcam1P29533 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vcam1P29533 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Vcam1P29533 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vcam1P29533 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vcam1P29533 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Vcam1P29533 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vcam1P29533 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vcam1P29533 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vcam1P29533 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vcam1P29533 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vcam1P29533 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vcam1P29533 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Vcam1P29533 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vcam1P29533 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC14.34□□□□□ -0.11
Vcam1P29533 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vcam1P29533 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC14.34□□□□□ -0.11
Vcam1P29533 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Vcam1P29533 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC14.34□□□□□ -0.11
Vcam1P29533 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vcam1P29533 Gm27530-201ENSMUST00000184096 98 ntBASIC14.34□□□□□ -0.11
Vcam1P29533 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Vcam1P29533 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vcam1P29533 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC14.34□□□□□ -0.11
Vcam1P29533 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC14.34□□□□□ -0.11
Vcam1P29533 Gm7207-201ENSMUST00000211575 1067 ntBASIC14.34□□□□□ -0.11
Vcam1P29533 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Vcam1P29533 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vcam1P29533 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vcam1P29533 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vcam1P29533 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vcam1P29533 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Vcam1P29533 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vcam1P29533 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vcam1P29533 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vcam1P29533 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vcam1P29533 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.34□□□□□ -0.11
Vcam1P29533 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vcam1P29533 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Vcam1P29533 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Vcam1P29533 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Vcam1P29533 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Vcam1P29533 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Vcam1P29533 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC14.33□□□□□ -0.11
Vcam1P29533 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC14.33□□□□□ -0.11
Vcam1P29533 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Vcam1P29533 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Vcam1P29533 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vcam1P29533 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vcam1P29533 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Vcam1P29533 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vcam1P29533 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Vcam1P29533 Gm13045-201ENSMUST00000119019 712 ntBASIC14.33□□□□□ -0.12
Vcam1P29533 H2-Q3-201ENSMUST00000172583 608 ntBASIC14.33□□□□□ -0.12
Vcam1P29533 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Vcam1P29533 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC14.33□□□□□ -0.12
Vcam1P29533 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Vcam1P29533 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vcam1P29533 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vcam1P29533 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Vcam1P29533 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Vcam1P29533 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Vcam1P29533 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Vcam1P29533 AC154747.3-201ENSMUST00000224471 3470 ntBASIC14.33□□□□□ -0.12
Vcam1P29533 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Vcam1P29533 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vcam1P29533 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vcam1P29533 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vcam1P29533 Gm7049-201ENSMUST00000223520 1712 ntBASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms