Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Ccl3P10855 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Ccl3P10855 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccl3P10855 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccl3P10855 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccl3P10855 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccl3P10855 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ccl3P10855 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.05□□□□□ -0.64
Ccl3P10855 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccl3P10855 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccl3P10855 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC11.05□□□□□ -0.64
Ccl3P10855 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Ccl3P10855 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Ccl3P10855 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Ccl3P10855 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccl3P10855 Gm30238-201ENSMUST00000195528 2603 ntBASIC11.05□□□□□ -0.64
Ccl3P10855 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccl3P10855 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccl3P10855 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccl3P10855 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Ccl3P10855 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccl3P10855 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccl3P10855 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC11.04□□□□□ -0.64
Ccl3P10855 Gm12196-201ENSMUST00000120954 262 ntBASIC11.04□□□□□ -0.64
Ccl3P10855 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC11.04□□□□□ -0.64
Ccl3P10855 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccl3P10855 Gm23119-201ENSMUST00000158610 140 ntBASIC11.04□□□□□ -0.64
Ccl3P10855 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC11.04□□□□□ -0.64
Ccl3P10855 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.04□□□□□ -0.64
Ccl3P10855 Gm43830-201ENSMUST00000198760 1067 ntBASIC11.04□□□□□ -0.64
Ccl3P10855 AC122876.1-201ENSMUST00000217619 825 ntBASIC11.04□□□□□ -0.64
Ccl3P10855 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.04□□□□□ -0.64
Ccl3P10855 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccl3P10855 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccl3P10855 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccl3P10855 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ccl3P10855 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC11.04□□□□□ -0.64
Ccl3P10855 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccl3P10855 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccl3P10855 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ccl3P10855 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
Ccl3P10855 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccl3P10855 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Ccl3P10855 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ccl3P10855 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccl3P10855 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccl3P10855 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccl3P10855 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccl3P10855 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccl3P10855 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccl3P10855 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.03□□□□□ -0.64
Ccl3P10855 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ccl3P10855 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccl3P10855 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccl3P10855 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccl3P10855 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccl3P10855 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccl3P10855 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccl3P10855 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccl3P10855 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccl3P10855 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccl3P10855 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccl3P10855 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC11.03□□□□□ -0.64
Ccl3P10855 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccl3P10855 Gm23596-201ENSMUST00000104304 132 ntBASIC11.03□□□□□ -0.64
Ccl3P10855 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC11.03□□□□□ -0.64
Ccl3P10855 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccl3P10855 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ccl3P10855 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC11.03□□□□□ -0.64
Ccl3P10855 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.03□□□□□ -0.64
Ccl3P10855 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ccl3P10855 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ccl3P10855 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Ccl3P10855 Gm37246-201ENSMUST00000192665 835 ntBASIC11.03□□□□□ -0.64
Ccl3P10855 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.03□□□□□ -0.64
Ccl3P10855 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Ccl3P10855 AC135469.1-201ENSMUST00000225984 772 ntBASIC11.03□□□□□ -0.64
Ccl3P10855 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.03□□□□□ -0.64
Ccl3P10855 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccl3P10855 Gm5455-201ENSMUST00000058710 715 ntBASIC11.03□□□□□ -0.64
Ccl3P10855 Gm10179-201ENSMUST00000086233 688 ntBASIC11.03□□□□□ -0.64
Ccl3P10855 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccl3P10855 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccl3P10855 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccl3P10855 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccl3P10855 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Ccl3P10855 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC11.03□□□□□ -0.64
Ccl3P10855 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.03□□□□□ -0.64
Ccl3P10855 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccl3P10855 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccl3P10855 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ccl3P10855 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.03□□□□□ -0.64
Ccl3P10855 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC11.03□□□□□ -0.64
Ccl3P10855 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ccl3P10855 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ccl3P10855 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Ccl3P10855 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Ccl3P10855 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.02□□□□□ -0.64
Ccl3P10855 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ccl3P10855 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.02□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms