Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Cd63-ps-202ENSMUST00000154992 717 ntBASIC16.15■□□□□ 0.18
Hoxc9P09633 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
Hoxc9P09633 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC16.15■□□□□ 0.18
Hoxc9P09633 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Hoxc9P09633 Gm4157-201ENSMUST00000211647 679 ntBASIC16.15■□□□□ 0.18
Hoxc9P09633 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hoxc9P09633 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hoxc9P09633 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hoxc9P09633 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Hoxc9P09633 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Hoxc9P09633 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Hoxc9P09633 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hoxc9P09633 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hoxc9P09633 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hoxc9P09633 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hoxc9P09633 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Hoxc9P09633 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Hoxc9P09633 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Hoxc9P09633 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Hoxc9P09633 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hoxc9P09633 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Hoxc9P09633 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
Hoxc9P09633 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Hoxc9P09633 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
Hoxc9P09633 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Hoxc9P09633 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Hoxc9P09633 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Hoxc9P09633 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Hoxc9P09633 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hoxc9P09633 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Hoxc9P09633 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC16.14■□□□□ 0.17
Hoxc9P09633 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hoxc9P09633 Gm8199-201ENSMUST00000121323 823 ntBASIC16.14■□□□□ 0.17
Hoxc9P09633 Gm12208-201ENSMUST00000122004 163 ntBASIC16.14■□□□□ 0.17
Hoxc9P09633 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Hoxc9P09633 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC16.14■□□□□ 0.17
Hoxc9P09633 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC16.14■□□□□ 0.17
Hoxc9P09633 Gm45706-201ENSMUST00000213063 2136 ntBASIC16.14■□□□□ 0.17
Hoxc9P09633 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Hoxc9P09633 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hoxc9P09633 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Hoxc9P09633 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Hoxc9P09633 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hoxc9P09633 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hoxc9P09633 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC16.14■□□□□ 0.17
Hoxc9P09633 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hoxc9P09633 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Hoxc9P09633 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hoxc9P09633 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hoxc9P09633 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Hoxc9P09633 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hoxc9P09633 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Hoxc9P09633 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hoxc9P09633 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hoxc9P09633 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hoxc9P09633 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hoxc9P09633 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hoxc9P09633 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Hoxc9P09633 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hoxc9P09633 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Hoxc9P09633 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hoxc9P09633 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hoxc9P09633 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Hoxc9P09633 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hoxc9P09633 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC16.13■□□□□ 0.17
Hoxc9P09633 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC16.13■□□□□ 0.17
Hoxc9P09633 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hoxc9P09633 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hoxc9P09633 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hoxc9P09633 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hoxc9P09633 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hoxc9P09633 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Hoxc9P09633 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hoxc9P09633 Gm12857-201ENSMUST00000117678 592 ntBASIC16.13■□□□□ 0.17
Hoxc9P09633 Gm14724-201ENSMUST00000118400 537 ntBASIC16.13■□□□□ 0.17
Hoxc9P09633 Gm23085-201ENSMUST00000157849 293 ntBASIC16.13■□□□□ 0.17
Hoxc9P09633 Gm17391-201ENSMUST00000171036 126 ntBASIC16.13■□□□□ 0.17
Hoxc9P09633 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Hoxc9P09633 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC16.13■□□□□ 0.17
Hoxc9P09633 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Hoxc9P09633 AC135469.1-201ENSMUST00000225984 772 ntBASIC16.13■□□□□ 0.17
Hoxc9P09633 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hoxc9P09633 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hoxc9P09633 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
Hoxc9P09633 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hoxc9P09633 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hoxc9P09633 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hoxc9P09633 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Hoxc9P09633 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hoxc9P09633 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hoxc9P09633 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hoxc9P09633 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Hoxc9P09633 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Hoxc9P09633 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Hoxc9P09633 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hoxc9P09633 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hoxc9P09633 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Hoxc9P09633 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Hoxc9P09633 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hoxc9P09633 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms