Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.96□□□□□ -0.33
PrnpP04925 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
PrnpP04925 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
PrnpP04925 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
PrnpP04925 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
PrnpP04925 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
PrnpP04925 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
PrnpP04925 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
PrnpP04925 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.96□□□□□ -0.34
PrnpP04925 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
PrnpP04925 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
PrnpP04925 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
PrnpP04925 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
PrnpP04925 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
PrnpP04925 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PrnpP04925 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.95□□□□□ -0.34
PrnpP04925 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PrnpP04925 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PrnpP04925 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
PrnpP04925 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PrnpP04925 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
PrnpP04925 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
PrnpP04925 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.95□□□□□ -0.34
PrnpP04925 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PrnpP04925 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PrnpP04925 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PrnpP04925 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PrnpP04925 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
PrnpP04925 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PrnpP04925 Acot6-202ENSMUST00000222921 3622 ntBASIC12.95□□□□□ -0.34
PrnpP04925 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
PrnpP04925 Gm12196-201ENSMUST00000120954 262 ntBASIC12.95□□□□□ -0.34
PrnpP04925 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PrnpP04925 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
PrnpP04925 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC12.95□□□□□ -0.34
PrnpP04925 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
PrnpP04925 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
PrnpP04925 Gm5051-201ENSMUST00000204085 485 ntBASIC12.95□□□□□ -0.34
PrnpP04925 AC125486.1-201ENSMUST00000218701 320 ntBASIC12.95□□□□□ -0.34
PrnpP04925 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.95□□□□□ -0.34
PrnpP04925 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
PrnpP04925 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.95□□□□□ -0.34
PrnpP04925 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
PrnpP04925 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PrnpP04925 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
PrnpP04925 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
PrnpP04925 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.95□□□□□ -0.34
PrnpP04925 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.95□□□□□ -0.34
PrnpP04925 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PrnpP04925 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PrnpP04925 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PrnpP04925 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
PrnpP04925 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PrnpP04925 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
PrnpP04925 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
PrnpP04925 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PrnpP04925 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PrnpP04925 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PrnpP04925 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PrnpP04925 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.94□□□□□ -0.34
PrnpP04925 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PrnpP04925 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
PrnpP04925 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
PrnpP04925 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
PrnpP04925 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
PrnpP04925 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
PrnpP04925 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
PrnpP04925 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
PrnpP04925 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.94□□□□□ -0.34
PrnpP04925 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.94□□□□□ -0.34
PrnpP04925 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
PrnpP04925 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
PrnpP04925 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
PrnpP04925 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.94□□□□□ -0.34
PrnpP04925 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
PrnpP04925 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
PrnpP04925 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PrnpP04925 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
PrnpP04925 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
PrnpP04925 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
PrnpP04925 Gm6506-201ENSMUST00000119775 1136 ntBASIC12.94□□□□□ -0.34
PrnpP04925 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
PrnpP04925 Gm25881-201ENSMUST00000157783 103 ntBASIC12.94□□□□□ -0.34
PrnpP04925 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC12.94□□□□□ -0.34
PrnpP04925 Mir7032-201ENSMUST00000185154 79 ntBASIC12.94□□□□□ -0.34
PrnpP04925 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC12.94□□□□□ -0.34
PrnpP04925 Gm43184-201ENSMUST00000197247 542 ntBASIC12.94□□□□□ -0.34
PrnpP04925 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
PrnpP04925 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.94□□□□□ -0.34
PrnpP04925 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
PrnpP04925 Gm5455-201ENSMUST00000058710 715 ntBASIC12.94□□□□□ -0.34
PrnpP04925 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
PrnpP04925 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
PrnpP04925 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
PrnpP04925 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PrnpP04925 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PrnpP04925 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
PrnpP04925 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
PrnpP04925 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
PrnpP04925 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms