Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Col4a1P02463 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col4a1P02463 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Col4a1P02463 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col4a1P02463 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col4a1P02463 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC15.1■□□□□ 0.01
Col4a1P02463 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Col4a1P02463 Ntrk2-209ENSMUST00000225950 2640 ntBASIC15.1■□□□□ 0.01
Col4a1P02463 Gm6189-201ENSMUST00000164487 2082 ntBASIC15.1■□□□□ 0.01
Col4a1P02463 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
Col4a1P02463 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Col4a1P02463 Gm13937-201ENSMUST00000121000 988 ntBASIC15.1■□□□□ 0.01
Col4a1P02463 Gm22138-201ENSMUST00000158748 128 ntBASIC15.1■□□□□ 0.01
Col4a1P02463 Gm8194-201ENSMUST00000159783 859 ntBASIC15.1■□□□□ 0.01
Col4a1P02463 Gm4034-201ENSMUST00000187674 480 ntBASIC15.1■□□□□ 0.01
Col4a1P02463 Gm5714-201ENSMUST00000197343 566 ntBASIC15.1■□□□□ 0.01
Col4a1P02463 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC15.1■□□□□ 0.01
Col4a1P02463 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC15.1■□□□□ 0.01
Col4a1P02463 Gm6905-201ENSMUST00000205729 511 ntBASIC15.1■□□□□ 0.01
Col4a1P02463 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC15.1■□□□□ 0.01
Col4a1P02463 Gm2517-201ENSMUST00000215651 348 ntBASIC15.1■□□□□ 0.01
Col4a1P02463 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col4a1P02463 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col4a1P02463 Gm45605-201ENSMUST00000210265 4269 ntBASIC15.1■□□□□ 0.01
Col4a1P02463 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col4a1P02463 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col4a1P02463 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Col4a1P02463 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Col4a1P02463 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col4a1P02463 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col4a1P02463 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col4a1P02463 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Col4a1P02463 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Col4a1P02463 Gm18782-201ENSMUST00000209023 1399 ntBASIC15.1■□□□□ 0.01
Col4a1P02463 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col4a1P02463 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col4a1P02463 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col4a1P02463 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col4a1P02463 Gm37348-201ENSMUST00000193104 1789 ntBASIC15.1■□□□□ 0.01
Col4a1P02463 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col4a1P02463 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col4a1P02463 Gm25076-201ENSMUST00000104098 132 ntBASIC15.09■□□□□ 0.01
Col4a1P02463 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC15.09■□□□□ 0.01
Col4a1P02463 Gm15566-201ENSMUST00000121130 590 ntBASIC15.09■□□□□ 0.01
Col4a1P02463 Gm13263-201ENSMUST00000121271 838 ntBASIC15.09■□□□□ 0.01
Col4a1P02463 Gm6485-201ENSMUST00000160676 439 ntBASIC15.09■□□□□ 0.01
Col4a1P02463 Gm9132-201ENSMUST00000210182 832 ntBASIC15.09■□□□□ 0.01
Col4a1P02463 CT009713.8-202ENSMUST00000224732 385 ntBASIC15.09■□□□□ 0.01
Col4a1P02463 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Col4a1P02463 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col4a1P02463 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC15.09■□□□□ 0.01
Col4a1P02463 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col4a1P02463 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col4a1P02463 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col4a1P02463 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col4a1P02463 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Col4a1P02463 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col4a1P02463 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col4a1P02463 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col4a1P02463 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col4a1P02463 Gm12419-201ENSMUST00000116649 636 ntBASIC15.09■□□□□ 0.01
Col4a1P02463 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC15.09■□□□□ 0.01
Col4a1P02463 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col4a1P02463 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Col4a1P02463 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Col4a1P02463 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC15.09■□□□□ 0.01
Col4a1P02463 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col4a1P02463 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Col4a1P02463 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC15.09■□□□□ 0.01
Col4a1P02463 Gm18041-201ENSMUST00000218210 618 ntBASIC15.09■□□□□ 0.01
Col4a1P02463 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC15.09■□□□□ 0.01
Col4a1P02463 AC112945.1-201ENSMUST00000226413 514 ntBASIC15.09■□□□□ 0.01
Col4a1P02463 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col4a1P02463 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
Col4a1P02463 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col4a1P02463 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col4a1P02463 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC15.09■□□□□ 0.01
Col4a1P02463 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col4a1P02463 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Col4a1P02463 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Col4a1P02463 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Col4a1P02463 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Col4a1P02463 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Col4a1P02463 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Col4a1P02463 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Col4a1P02463 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Col4a1P02463 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Col4a1P02463 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC15.08■□□□□ 0
Col4a1P02463 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC15.08■□□□□ 0
Col4a1P02463 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Col4a1P02463 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Col4a1P02463 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Col4a1P02463 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Col4a1P02463 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Col4a1P02463 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Col4a1P02463 Gm11892-201ENSMUST00000117711 1202 ntBASIC15.08■□□□□ 0
Col4a1P02463 Gm11836-201ENSMUST00000121022 441 ntBASIC15.08■□□□□ 0
Col4a1P02463 Gm11675-201ENSMUST00000121873 832 ntBASIC15.08■□□□□ 0
Col4a1P02463 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC15.08■□□□□ 0
Col4a1P02463 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms