Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
TcraP01849 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC9.17□□□□□ -0.94
TcraP01849 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
TcraP01849 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
TcraP01849 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
TcraP01849 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
TcraP01849 Gm43984-201ENSMUST00000204572 2864 ntBASIC9.17□□□□□ -0.94
TcraP01849 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
TcraP01849 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
TcraP01849 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
TcraP01849 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
TcraP01849 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC9.17□□□□□ -0.94
TcraP01849 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
TcraP01849 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
TcraP01849 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
TcraP01849 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
TcraP01849 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
TcraP01849 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
TcraP01849 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
TcraP01849 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
TcraP01849 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
TcraP01849 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
TcraP01849 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
TcraP01849 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
TcraP01849 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
TcraP01849 AC211878.3-201ENSMUST00000222629 2018 ntBASIC9.16□□□□□ -0.94
TcraP01849 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
TcraP01849 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
TcraP01849 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
TcraP01849 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
TcraP01849 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
TcraP01849 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
TcraP01849 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC9.16□□□□□ -0.94
TcraP01849 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC9.16□□□□□ -0.94
TcraP01849 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
TcraP01849 Gm13453-201ENSMUST00000118708 357 ntBASIC9.16□□□□□ -0.94
TcraP01849 Gm12428-201ENSMUST00000119844 727 ntBASIC9.16□□□□□ -0.94
TcraP01849 Gm13616-201ENSMUST00000120600 222 ntBASIC9.16□□□□□ -0.94
TcraP01849 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC9.16□□□□□ -0.94
TcraP01849 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC9.16□□□□□ -0.94
TcraP01849 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
TcraP01849 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC9.16□□□□□ -0.94
TcraP01849 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC9.16□□□□□ -0.94
TcraP01849 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC9.16□□□□□ -0.94
TcraP01849 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC9.16□□□□□ -0.94
TcraP01849 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC9.16□□□□□ -0.94
TcraP01849 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
TcraP01849 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
TcraP01849 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
TcraP01849 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC9.16□□□□□ -0.94
TcraP01849 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
TcraP01849 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
TcraP01849 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
TcraP01849 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC9.16□□□□□ -0.94
TcraP01849 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
TcraP01849 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
TcraP01849 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
TcraP01849 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
TcraP01849 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
TcraP01849 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
TcraP01849 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
TcraP01849 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
TcraP01849 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
TcraP01849 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
TcraP01849 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
TcraP01849 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
TcraP01849 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
TcraP01849 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
TcraP01849 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
TcraP01849 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
TcraP01849 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
TcraP01849 Gm43102-201ENSMUST00000201004 2324 ntBASIC9.15□□□□□ -0.94
TcraP01849 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
TcraP01849 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
TcraP01849 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC9.15□□□□□ -0.94
TcraP01849 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
TcraP01849 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
TcraP01849 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC9.15□□□□□ -0.94
TcraP01849 AC159621.2-201ENSMUST00000223519 1326 ntBASIC9.15□□□□□ -0.94
TcraP01849 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
TcraP01849 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
TcraP01849 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC9.15□□□□□ -0.94
TcraP01849 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
TcraP01849 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
TcraP01849 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
TcraP01849 Gm13886-201ENSMUST00000117876 1183 ntBASIC9.15□□□□□ -0.94
TcraP01849 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
TcraP01849 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
TcraP01849 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
TcraP01849 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC9.15□□□□□ -0.94
TcraP01849 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
TcraP01849 AC154305.4-201ENSMUST00000224520 614 ntBASIC9.15□□□□□ -0.94
TcraP01849 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
TcraP01849 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
TcraP01849 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC9.15□□□□□ -0.94
TcraP01849 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
TcraP01849 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
TcraP01849 AC154639.1-201ENSMUST00000224393 2849 ntBASIC9.15□□□□□ -0.94
TcraP01849 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.95
TcraP01849 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms