Protein–RNA interactions for Protein: P01139

Ngf, Beta-nerve growth factor, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NgfP01139 Gm18041-201ENSMUST00000218210 618 ntBASIC11.04□□□□□ -0.64
NgfP01139 Gm29787-201ENSMUST00000222129 849 ntBASIC11.04□□□□□ -0.64
NgfP01139 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NgfP01139 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
NgfP01139 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NgfP01139 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NgfP01139 Gm5455-201ENSMUST00000058710 715 ntBASIC11.04□□□□□ -0.64
NgfP01139 Gm26035-201ENSMUST00000083065 308 ntBASIC11.04□□□□□ -0.64
NgfP01139 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
NgfP01139 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NgfP01139 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
NgfP01139 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NgfP01139 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NgfP01139 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
NgfP01139 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NgfP01139 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NgfP01139 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
NgfP01139 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.04□□□□□ -0.64
NgfP01139 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
NgfP01139 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NgfP01139 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NgfP01139 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
NgfP01139 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
NgfP01139 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NgfP01139 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
NgfP01139 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
NgfP01139 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NgfP01139 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NgfP01139 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
NgfP01139 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
NgfP01139 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NgfP01139 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
NgfP01139 Gm6580-201ENSMUST00000117504 1357 ntBASIC11.03□□□□□ -0.64
NgfP01139 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
NgfP01139 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
NgfP01139 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
NgfP01139 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
NgfP01139 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
NgfP01139 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.03□□□□□ -0.64
NgfP01139 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
NgfP01139 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
NgfP01139 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
NgfP01139 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
NgfP01139 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
NgfP01139 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
NgfP01139 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
NgfP01139 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
NgfP01139 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
NgfP01139 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC11.03□□□□□ -0.64
NgfP01139 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
NgfP01139 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
NgfP01139 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
NgfP01139 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
NgfP01139 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
NgfP01139 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
NgfP01139 Gm13045-201ENSMUST00000119019 712 ntBASIC11.03□□□□□ -0.64
NgfP01139 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
NgfP01139 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC11.03□□□□□ -0.64
NgfP01139 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.03□□□□□ -0.64
NgfP01139 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC11.03□□□□□ -0.64
NgfP01139 Gm10109-202ENSMUST00000206890 1211 ntBASIC11.03□□□□□ -0.64
NgfP01139 Gm45118-201ENSMUST00000208928 825 ntBASIC11.03□□□□□ -0.64
NgfP01139 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.03□□□□□ -0.64
NgfP01139 Gm18556-201ENSMUST00000219748 1031 ntBASIC11.03□□□□□ -0.64
NgfP01139 CT009718.3-201ENSMUST00000221116 367 ntBASIC11.03□□□□□ -0.64
NgfP01139 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
NgfP01139 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
NgfP01139 Gm21811-201ENSMUST00000096485 930 ntBASIC11.03□□□□□ -0.64
NgfP01139 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
NgfP01139 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
NgfP01139 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.03□□□□□ -0.64
NgfP01139 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
NgfP01139 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
NgfP01139 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
NgfP01139 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
NgfP01139 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
NgfP01139 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.03□□□□□ -0.64
NgfP01139 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
NgfP01139 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
NgfP01139 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
NgfP01139 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
NgfP01139 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
NgfP01139 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
NgfP01139 Gm10176-201ENSMUST00000159707 2264 ntBASIC11.02□□□□□ -0.64
NgfP01139 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.64
NgfP01139 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.02□□□□□ -0.64
NgfP01139 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
NgfP01139 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
NgfP01139 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
NgfP01139 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
NgfP01139 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
NgfP01139 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
NgfP01139 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
NgfP01139 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
NgfP01139 Gm14058-201ENSMUST00000116082 735 ntBASIC11.02□□□□□ -0.65
NgfP01139 Gm13408-201ENSMUST00000119822 798 ntBASIC11.02□□□□□ -0.65
NgfP01139 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC11.02□□□□□ -0.65
NgfP01139 Gm13935-201ENSMUST00000121859 798 ntBASIC11.02□□□□□ -0.65
NgfP01139 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.02□□□□□ -0.65
NgfP01139 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms