Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ubr1O70481 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
Ubr1O70481 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ubr1O70481 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Ubr1O70481 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC15.96■□□□□ 0.15
Ubr1O70481 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ubr1O70481 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Ubr1O70481 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Ubr1O70481 Gm15352-201ENSMUST00000118696 270 ntBASIC15.96■□□□□ 0.15
Ubr1O70481 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ubr1O70481 Gm11836-201ENSMUST00000121022 441 ntBASIC15.96■□□□□ 0.15
Ubr1O70481 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Ubr1O70481 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ubr1O70481 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC15.96■□□□□ 0.15
Ubr1O70481 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC15.96■□□□□ 0.15
Ubr1O70481 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Ubr1O70481 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ubr1O70481 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ubr1O70481 Gm9192-201ENSMUST00000183221 985 ntBASIC15.96■□□□□ 0.15
Ubr1O70481 Gm38210-201ENSMUST00000191944 809 ntBASIC15.96■□□□□ 0.15
Ubr1O70481 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Ubr1O70481 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Ubr1O70481 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Ubr1O70481 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ubr1O70481 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ubr1O70481 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
Ubr1O70481 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ubr1O70481 AC129931.1-201ENSMUST00000228865 1861 ntBASIC15.96■□□□□ 0.15
Ubr1O70481 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ubr1O70481 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
Ubr1O70481 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC15.96■□□□□ 0.14
Ubr1O70481 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.14
Ubr1O70481 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ubr1O70481 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ubr1O70481 Gm25076-201ENSMUST00000104098 132 ntBASIC15.95■□□□□ 0.14
Ubr1O70481 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ubr1O70481 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ubr1O70481 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC15.95■□□□□ 0.14
Ubr1O70481 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ubr1O70481 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC15.95■□□□□ 0.14
Ubr1O70481 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC15.95■□□□□ 0.14
Ubr1O70481 AC159103.1-201ENSMUST00000228325 429 ntBASIC15.95■□□□□ 0.14
Ubr1O70481 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Ubr1O70481 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ubr1O70481 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Ubr1O70481 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ubr1O70481 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ubr1O70481 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ubr1O70481 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ubr1O70481 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ubr1O70481 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Ubr1O70481 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC15.95■□□□□ 0.14
Ubr1O70481 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ubr1O70481 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ubr1O70481 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ubr1O70481 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
Ubr1O70481 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Ubr1O70481 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ubr1O70481 Gm22920-201ENSMUST00000102175 109 ntBASIC15.95■□□□□ 0.14
Ubr1O70481 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ubr1O70481 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ubr1O70481 Selenot-ps-201ENSMUST00000119098 593 ntBASIC15.95■□□□□ 0.14
Ubr1O70481 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ubr1O70481 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ubr1O70481 Gm5778-201ENSMUST00000171003 1072 ntBASIC15.95■□□□□ 0.14
Ubr1O70481 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC15.95■□□□□ 0.14
Ubr1O70481 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ubr1O70481 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC15.95■□□□□ 0.14
Ubr1O70481 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC15.95■□□□□ 0.14
Ubr1O70481 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC15.95■□□□□ 0.14
Ubr1O70481 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ubr1O70481 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC15.95■□□□□ 0.14
Ubr1O70481 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ubr1O70481 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Ubr1O70481 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Ubr1O70481 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Ubr1O70481 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ubr1O70481 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ubr1O70481 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ubr1O70481 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ubr1O70481 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ubr1O70481 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC15.94■□□□□ 0.14
Ubr1O70481 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ubr1O70481 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Ubr1O70481 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Ubr1O70481 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Ubr1O70481 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
Ubr1O70481 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ubr1O70481 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.94■□□□□ 0.14
Ubr1O70481 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Ubr1O70481 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ubr1O70481 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC15.93■□□□□ 0.14
Ubr1O70481 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ubr1O70481 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ubr1O70481 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Ubr1O70481 CT009489.1-201ENSMUST00000227740 1893 ntBASIC15.93■□□□□ 0.14
Ubr1O70481 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Ubr1O70481 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC15.93■□□□□ 0.14
Ubr1O70481 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ubr1O70481 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms