Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.46□□□□□ -0.41
Ldb2O55203 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ldb2O55203 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.46□□□□□ -0.41
Ldb2O55203 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.46□□□□□ -0.41
Ldb2O55203 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Ldb2O55203 Mir6420-201ENSMUST00000185032 102 ntBASIC12.46□□□□□ -0.41
Ldb2O55203 Gm18304-201ENSMUST00000189162 546 ntBASIC12.46□□□□□ -0.41
Ldb2O55203 Gm42693-201ENSMUST00000196779 631 ntBASIC12.46□□□□□ -0.41
Ldb2O55203 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ldb2O55203 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.46□□□□□ -0.41
Ldb2O55203 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ldb2O55203 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ldb2O55203 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ldb2O55203 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ldb2O55203 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ldb2O55203 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.46□□□□□ -0.41
Ldb2O55203 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ldb2O55203 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Ldb2O55203 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.46□□□□□ -0.42
Ldb2O55203 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Ldb2O55203 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.42
Ldb2O55203 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ldb2O55203 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.46□□□□□ -0.42
Ldb2O55203 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ldb2O55203 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ldb2O55203 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ldb2O55203 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ldb2O55203 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ldb2O55203 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ldb2O55203 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ldb2O55203 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ldb2O55203 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ldb2O55203 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ldb2O55203 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Ldb2O55203 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ldb2O55203 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Ldb2O55203 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ldb2O55203 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.45□□□□□ -0.42
Ldb2O55203 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ldb2O55203 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.45□□□□□ -0.42
Ldb2O55203 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.45□□□□□ -0.42
Ldb2O55203 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.45□□□□□ -0.42
Ldb2O55203 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.45□□□□□ -0.42
Ldb2O55203 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.45□□□□□ -0.42
Ldb2O55203 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.45□□□□□ -0.42
Ldb2O55203 Gm18054-201ENSMUST00000207539 555 ntBASIC12.45□□□□□ -0.42
Ldb2O55203 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.45□□□□□ -0.42
Ldb2O55203 Gm45880-201ENSMUST00000213041 853 ntBASIC12.45□□□□□ -0.42
Ldb2O55203 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Ldb2O55203 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.45□□□□□ -0.42
Ldb2O55203 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ldb2O55203 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Ldb2O55203 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Ldb2O55203 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Ldb2O55203 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ldb2O55203 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ldb2O55203 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.45□□□□□ -0.42
Ldb2O55203 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ldb2O55203 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Ldb2O55203 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ldb2O55203 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ldb2O55203 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ldb2O55203 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ldb2O55203 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ldb2O55203 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ldb2O55203 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ldb2O55203 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ldb2O55203 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.45□□□□□ -0.42
Ldb2O55203 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.45□□□□□ -0.42
Ldb2O55203 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ldb2O55203 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.45□□□□□ -0.42
Ldb2O55203 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ldb2O55203 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ldb2O55203 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ldb2O55203 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ldb2O55203 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ldb2O55203 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ldb2O55203 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ldb2O55203 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ldb2O55203 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ldb2O55203 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ldb2O55203 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ldb2O55203 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.44□□□□□ -0.42
Ldb2O55203 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.44□□□□□ -0.42
Ldb2O55203 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Ldb2O55203 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ldb2O55203 Gm13875-201ENSMUST00000120162 282 ntBASIC12.44□□□□□ -0.42
Ldb2O55203 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.44□□□□□ -0.42
Ldb2O55203 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Ldb2O55203 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ldb2O55203 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ldb2O55203 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.44□□□□□ -0.42
Ldb2O55203 Gm43118-201ENSMUST00000199149 775 ntBASIC12.44□□□□□ -0.42
Ldb2O55203 Gm39404-201ENSMUST00000216350 313 ntBASIC12.44□□□□□ -0.42
Ldb2O55203 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ldb2O55203 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ldb2O55203 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ldb2O55203 Gm9823-201ENSMUST00000051212 327 ntBASIC12.44□□□□□ -0.42
Ldb2O55203 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ldb2O55203 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms